Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme02g02117 ATGGATCCAGAAACCCTCTCCGCCACTTTGTTCAAATGGGAGCCTCGAGAAATGGTGGCAGGCGGCAGCGGCGCACCCCTCCCAGCACCACTGCCCCCCTACTCGCTGCGGCCGAGAGAGTTGGGATTGGGAGGCCTGGAGGATTTGTTTCAGGCTTACGGAATAAGGTACTACACCGCCTCTAAAATTGCAGAACTCGGATTCACCGTCAGCACCCTCGTGGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTCCGCTGGGACCTTCTGGTGGGTGAAAGGTACGGAATTAAGGCTGCTGTACGAGCCGAACGCAGACGTCTAGATGACGAGATCGAATCCTCCAGACGCCGTCACCTCTTGTCCAATGACACCACTACTAACGTCGTTCTCGATGCCCTCTCTCAGGAAGGGCTATCGGAAGAGCCGGTGCAGCAGGAGAAAGAGGCGGTGGGGAGCGGAGGAGGAGGAGCGTGGGAGGCAGTTGCAGCCGCTGAGATGAGGAAGAAGCAGCGGAGGAGAAATGGATCAAAAAAGAAGCAGGTGATAGCTTTGGAGGAGGATAACGATGAAAACGAAGGAGCTGGGGACGAGGAGGAGAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGAGGAAAGAAAAACGGCCTCGACTATCTTTTTCACCTCTATGAACAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCCAAGGAAAGAGGAGAAAAATGCCCCACTAAGGTGACGAACCAGGTGTTTAGATATGCAAAGAAGGCGGGTGCAAGTTACATAAACAAGCCAAAAATGAGACACTACGTGCATTGTTATGCGCTACATTGTCTGGACGAGGAGGCGTCAAACGCATTGAGGAGTGTTTTCAAAGAGAGGGGCGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTCTGGTGACCATAGCAGGTACCCAAGGTTGGGACATCGATGCCATTTTCAATGCACATCCACGCCTTGCCATCTGGTATGTGCCTACCAAACTCCGCCAACTCTGCCACGCAGAGCGCAATGGTTCCACAGCCTCGACCTCCACTGCCTCCGCTCACTTGCCCTTTTAA 1158 53.11 MDPETLSATLFKWEPREMVAGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTASKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIESSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGAWEAVAAAEMRKKQRRRNGSKKKQVIALEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRSVFKERGENVGAWRQACYKPLVTIAGTQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNGSTASTSTASAHLPF 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26911408 26914635 - MELO3C026157.2.1 Cme02g02117 322006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme02g02117 385 Gene3D Protein LEAFY 211 379 IPR038276 -
Cme02g02117 385 MobiDBLite consensus disorder prediction 175 214 - -
Cme02g02117 385 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 210 373 IPR035209 GO:0003677
Cme02g02117 385 PANTHER PROTEIN LEAFY 1 385 - -
Cme02g02117 385 PANTHER PROTEIN LEAFY 1 385 IPR002910 GO:0003677|GO:0006355
Cme02g02117 385 Pfam Floricaula / Leafy protein SAM domain 43 118 IPR035079 -
Cme02g02117 385 Coils Coil 105 125 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40965 PF17538 C_LFY_FLO 1.00E-106 CL0123 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme02g02117 - - csv:101205888 703.745