Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00122 ATGGGTCGGTGGAATGACAAACTTGTTGCCTTTATCAACAACAGATGGTTGGTTTTTGTTGCTGCAATATGGCTTCAATCTTGGGCTGGAATTGGGTATCTTTTTGGAAGTATATCGCCGGTAATCAAAACCAATTTGAGTTACAATCAGAGACAAGTTTCTCGTCTTGGTGTCGCTAAAGATCTTGGCGATAGCGTTGGCTTTTTGGCTGCCACGTTAACGGAGATATTGCCCTTTTGGGGAAGTCTCTTGGTCGGTGCTATCCATAACATTGTTGGGTATGGTTGGGTTTGGCTCATCGTCACTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTTTAAGTATGGATATCATTGCGCAGATGTGCGTTCTTGTATTTGTGGGAACGAACGGGGAGACGTACTTCAATACAGTTTCTTTGGTTTCTTGTGTACAAAACTTTCCGAAAAGCAGAGGCCCTGTGGTCGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCATCCATTCTCCTGATTCAGCCAATCTTATATTCATGGTTGCAGTAGGTCCTGCACTGGTGGCTATTGGTGTGATGTTTTTTATCAGACCTGTTGCCGGTCATCGACAAGTAAGGCCGTCCGATGGCATGAGCTTTTCTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCATATTTGATGGGAGTCATGCTTATTGAGGATCTTGTTACATTGAGCCCCACTGTGATAACCATATTTACTGTGGTTATGTTTGTCATCCTTCTTACGCCCTTTTTAATTCCCGTGACATTGACTTTTAGCTCGGAGACGACAACATATGCTGAGCAAGAGGCTCTCCTACCACCCTCTGAGAAAGAGGAACCTGCTAGAACTGAACCAGATGGTAATGAAGTGATATTTAGTGAGGTGGAAGATGAAAAATCCGAGGGAGAGGACTTACTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAGTTGCAAGCAAAACTATTGCAAGCAGCCGCAGAAGGAGCAGTAAGAGTCAAGAGGAGAAAGGGTCCACGCCGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTTCCTCCCATCTTCTTGGTTCCGGAACTGGCTTGACCGTGATTGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTACGATAATACACATATTTTTGTATCCCTGATCAGCATATGGAACTTTCTCGGCCGTGTTGGTGGTGGATATCTCTCTGAGATTGTTGTGAGAGATTTTGCTTATCCAAGACCCATTGCAATGACGATTGCGCAAGTCCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCCGGGGCAATGTACATTGGCACTCTCATAACAGGGCTCGGTTACGGGGCTCACTGGGCCATTGTACCTGCTACTGCCTCTGAATTGTTTGGCTTGAAAAAGTTTGGCGCTTTATACAACTTCATCACTCTCTCAACTCCTATGGGATCTTTGATATTTTCTGGCTTAATTGCGAGCAGTATATATGACAGCGAAGCCGAGAAGCAAGCTCGTAATCATCTCACACAGTTCCAGAGCTCCTCGTCATTGTGGTTCACTAGACTTTACGCCGAGGGACCACACAAGTGCGAGGGTGCCATATGCTTCTTTTTAACTTGTATGATAATGGCTGGATTCTGCGCGATTGCAGGGATATTAAGTTTAATTTTGGTGTATCGGACAAAGGGTGTTTACCACAACCTCTATGGAAAATCTCGTACATCAACACTTTCGTAG 1815 44.85 MGRWNDKLVAFINNRWLVFVAAIWLQSWAGIGYLFGSISPVIKTNLSYNQRQVSRLGVAKDLGDSVGFLAATLTEILPFWGSLLVGAIHNIVGYGWVWLIVTGRAPVLPLWALSMDIIAQMCVLVFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIIHSPDSANLIFMVAVGPALVAIGVMFFIRPVAGHRQVRPSDGMSFSSVYGVCLLLAAYLMGVMLIEDLVTLSPTVITIFTVVMFVILLTPFLIPVTLTFSSETTTYAEQEALLPPSEKEEPARTEPDGNEVIFSEVEDEKSEGEDLLPASERQKRIAQLQAKLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFSSHLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYLSEIVVRDFAYPRPIAMTIAQVLMIFGHVFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFITLSTPMGSLIFSGLIASSIYDSEAEKQARNHLTQFQSSSSLWFTRLYAEGPHKCEGAICFFLTCMIMAGFCAIAGILSLILVYRTKGVYHNLYGKSRTSTLS 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1625988 1629569 + MELO3C008180.2.1 Cme03g00122 322133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00122 604 MobiDBLite consensus disorder prediction 286 305 - -
Cme03g00122 604 SUPERFAMILY MFS general substrate transporter 10 210 IPR036259 -
Cme03g00122 604 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 600 - -
Cme03g00122 604 Pfam Nodulin-like 15 270 IPR010658 -
Cme03g00122 604 SUPERFAMILY MFS general substrate transporter 220 590 IPR036259 -
Cme03g00122 604 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 600 - -
Cme03g00122 604 Gene3D MFS general substrate transporter like domains 372 597 IPR036259 -
Cme03g00122 604 Coils Coil 324 344 - -
Cme03g00122 604 CDD MFS_Mch1p_like 15 576 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00122 Cme-Chr3:1625988 Cme07g02031 Cme-Chr7:25322006 2.62E-104 dispersed
Cme03g00122 Cme-Chr3:1625988 Cme11g00393 Cme-Chr11:3987240 8.29E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00122 - - csv:101211655 1124.38