Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00127 ATGTTTTGTATAAATAGGCAATGCATATATAATTGCCGAAGTAAAAAAACTAGTTATAGATTAAAGAAAATGGGATTGGCGTTTCGTTGGAAAGGTTTGGTTTTAGCGGTGATTGTTGCGGTGGCGGCGACGGAGACGGTGAAGAGAGGGAAGGCGCAATTAGTTGAAAATTTCTATGGCTCAAAATGCCCAAACTTAGAGCAGATCGTTACACAATCTGTCCAAACCAAAATTGCTCAAACTTTTGTCACAATTCCGGCAACTTTGAGACTCTTTTTCCATGATTGCTTTGTCGAGGGATGCGATGCTTCAGTGTTGATAGCTTCTCCAAATGGAGATGCGGAGAAAGATGCAAAAGACAATCTTTCATTAGCGGGAGATGGGTTTGACACTGTTGTTAAAGCAAAACAAGCGGTTGAAAATGTTTGTCCTGGTATCGTTTCTTGTGCTGACATCTTGGCTCTTGCAACTAGAGATGTTGTTAACTTGGCAGGAGGTCCACAATATAGTGTGGAACTTGGACGTAGAGATGGGCTTATTTCTCAAGCATCTCGAGTGGCAGGAAACCTACCAGAACCATCCTTCAATCTAAACCAACTAACAAACATGTTTGCCACCCACAACCTAACCTTAATTGATATGATTGCCCTTTCTGGAGCCCACACCTTGGGATTCTCCCATTGTGACCGTTTCGCAAATCGCCTTTACTCATTTTCACCTTTGTCTCCAACGGATCCATCGTTGGACCCTGGATACGCACGACAGTTAATGGATGCGTGTCCACATAATGTGGATCCTAGTGTGGCCATCAACATGGACCCTAAAACTCCTCAGACCTTTGACAACGTTTACTATCAAAACCTCATCTCTGGCAAAGGGTTATTCACTTCCGACCAGGTTTTGTTTACCGAGTCTGAATCACAACCGACGGTTAGTAGTTTTGCCACCAGTGGAGCAGAGTTTAATGCAACGTTTATCAGAGCCATGACCAAACAACTTTGGGGATTGCCTAAGCCCCAAGAAACATATACCACATTACAAGAATTCGGAGCTCTCCCAACAAAGATAAAGGCATCGGCTAAAGTAACGTAA 1092 43.22 MFCINRQCIYNCRSKKTSYRLKKMGLAFRWKGLVLAVIVAVAATETVKRGKAQLVENFYGSKCPNLEQIVTQSVQTKIAQTFVTIPATLRLFFHDCFVEGCDASVLIASPNGDAEKDAKDNLSLAGDGFDTVVKAKQAVENVCPGIVSCADILALATRDVVNLAGGPQYSVELGRRDGLISQASRVAGNLPEPSFNLNQLTNMFATHNLTLIDMIALSGAHTLGFSHCDRFANRLYSFSPLSPTDPSLDPGYARQLMDACPHNVDPSVAINMDPKTPQTFDNVYYQNLISGKGLFTSDQVLFTESESQPTVSSFATSGAEFNATFIRAMTKQLWGLPKPQETYTTLQEFGALPTKIKASAKVT 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1711737 1714919 - MELO3C008185.2.1 Cme03g00127 322138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00127 363 PANTHER PEROXIDASE 46 331 - -
Cme03g00127 363 PANTHER - 46 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 CDD secretory_peroxidase 53 331 IPR033905 GO:0004601|GO:0042744
Cme03g00127 363 PRINTS Plant peroxidase signature 127 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Plant peroxidase signature 271 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Plant peroxidase signature 87 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Plant peroxidase signature 165 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Plant peroxidase signature 146 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Plant peroxidase signature 212 224 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Plant peroxidase signature 287 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Plant peroxidase signature 63 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Haem peroxidase superfamily signature 147 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Haem peroxidase superfamily signature 213 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Haem peroxidase superfamily signature 165 177 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Haem peroxidase superfamily signature 273 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 PRINTS Haem peroxidase superfamily signature 85 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 SUPERFAMILY Heme-dependent peroxidases 53 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 Pfam Peroxidase 72 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 ProSiteProfiles Plant heme peroxidase family profile. 53 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00127 363 Gene3D - 57 190 - -
Cme03g00127 363 ProSitePatterns Peroxidases proximal heme-ligand signature. 213 223 IPR019793 -
Cme03g00127 363 Gene3D Peroxidase, domain 2 191 331 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00127 Cme-Chr3:1711737 Cme03g00129 Cme-Chr3:1748650 3.01E-151 dispersed
Cme03g00127 Cme-Chr3:1711737 Cme03g00128 Cme-Chr3:1727623 3.61E-150 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00127 K00430 - csv:101213580 553.903