Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00128 ATGAGTAATATAATAGAGAGGGAAGATATGGATGAATTGGGAGGAAGAAGAATGCGTTGGTTTCTGGTGTCGATCGTTTTAATGGGGATTTTTGTGGAAAGAGGAGAAGGGCAGTTGGTGGAAAACTTTTATAAATCCACTTGTCCAAAGCTGGAGCAAATAGTGAGACAAGCGGTTCGAAACAAGTTCTCTCAAACTATCATTACCATTCCTGCTACTCTCCGTCTCTTCTTCCACGACTGTTTTGTTGAGGGATGCGATGCTTCCGTCATGATTTCATCGCCAAGCGGAGACGCCGAGAAGGACGCTCAAGATAACCTTTCCCTCGCCGGAGATGGCTTCGACACCGTCGTCAAGGCTAAGCAAGCCGTCGAAGCCGCTTGCCCCGGCCGAGTCTCTTGCGCCGACATTTTAGCTCTCGCCGCCAGAGACGCCGTCGTCCTCGCCGGAGGCCCAAATTTCAACGTCGAATTAGGACGTCGCGACGGCTTAATCTCCAAAGCCTCACGCGTGGACGGCAATTTACCATCCCCAAATTTCGACCTTAACTCACTGACTTCCATGTTCGCCAAACACGGGCTGTCCCAAACCGACATGATCGCCCTCTCCGGCGCCCACACCATCGGTGCCTCCCATTGCAACCGCTTCTCGGATCGACTCTTCTCTGCTTCCGGTGTAGACCCGTCGCTTAACCCTGCTTACGCAGAAGAGCTGAAGCAAGCGTGCCCTCGGAATGTAGATCCAGGGGTGGTGGTGAAGCTGGATCCGAGTACTCCGGACAGTTTCGACAATGCATATTACCGAAATCTGGTGGAGGGAAAAGGATTGTTTAGATCAGATGAGGTTCTGTTCACGAACTCGGCATCGAAGGGGACGGTGGTGGGATTTGCGAATAAGGGAGGGGAGTTTAATGCGGCGTTTGTGGGGGCGATGAGGAAGCTTGGGAGAGTGGGGGTTAAGACGGGGAAGGCTGGAGAGATAAGAAGAGATTGTACTGCTTTCAATTGA 1008 51.98 MSNIIEREDMDELGGRRMRWFLVSIVLMGIFVERGEGQLVENFYKSTCPKLEQIVRQAVRNKFSQTIITIPATLRLFFHDCFVEGCDASVMISSPSGDAEKDAQDNLSLAGDGFDTVVKAKQAVEAACPGRVSCADILALAARDAVVLAGGPNFNVELGRRDGLISKASRVDGNLPSPNFDLNSLTSMFAKHGLSQTDMIALSGAHTIGASHCNRFSDRLFSASGVDPSLNPAYAEELKQACPRNVDPGVVVKLDPSTPDSFDNAYYRNLVEGKGLFRSDEVLFTNSASKGTVVGFANKGGEFNAAFVGAMRKLGRVGVKTGKAGEIRRDCTAFN 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1727623 1730758 - MELO3C008186.2.1 Cme03g00128 322139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00128 335 Gene3D - 42 335 - -
Cme03g00128 335 Gene3D Peroxidase, domain 2 176 314 - -
Cme03g00128 335 ProSiteProfiles Plant heme peroxidase family profile. 38 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PANTHER PEROXIDASE 22 335 - -
Cme03g00128 335 CDD secretory_peroxidase 38 334 IPR033905 GO:0004601|GO:0042744
Cme03g00128 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Cme03g00128 335 SUPERFAMILY Heme-dependent peroxidases 38 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 Pfam Peroxidase 55 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00128 335 PANTHER - 22 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00128 Cme-Chr3:1727623 Cme03g00130 Cme-Chr3:1748680 2.49E-161 dispersed
Cme12g01310 Cme-Chr12:21171442 Cme03g00128 Cme-Chr3:1727623 8.98E-36 dispersed
Cme12g01489 Cme-Chr12:22519596 Cme03g00128 Cme-Chr3:1727623 3.30E-64 dispersed
Cme03g00127 Cme-Chr3:1711737 Cme03g00128 Cme-Chr3:1727623 3.61E-150 tandem
Cme03g00128 Cme-Chr3:1727623 Cme03g00129 Cme-Chr3:1748650 2.49E-161 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00128 K00430 - csv:101213343 593.964