Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00130 ATGGGAGCCATGGCAATCCGAGTGGTGTTGTCTTTGGCTCTGGTTTGCATGCTCATTGCTGTCGCCCAGGCGCAGCTCTCCTTCAACTTCTACAATTCGTCGTGCCCAAATGTTGAACAAATTGTTCGCCAGGCTGTCAGCTTAAAGATCAGCCAAACATTCGTTACCATTCCAGCAACTCTTAGGCTTTTCTTCCATGACTGCTTTGTTCAGGGATGTGATGCTTCGGTTATGATAGCATCCCCCAGTGGTGATGCTGAAAAAGATTCGGAGGACAACTTGTCGTTGGCAGGAGATGGATTTGATACTGTGGTTAAGGCGAAGCAAGCTGTGGAAGCTCAATGTCCTGGAAAAGTATCGTGTGCAGATATTTTGACCATTGCTGCAAGGGATGTTGTGGTTTTGGCAGGAGGACCATATTTTGCAGTGGAATTAGGACGACGAGATGGGCTAATCTCAAAAGCCTCATTGGTAGCCGGAAACTTACCAGGACCAAATTTCAACCTAAGCCAACTAAACACAATGTTCGCCAAAAACAACTTAACCCAAACCGACATGATCGCATTATCAGGAGCCCACACGGTTGGGTTCTCACACTGCAATCGTTTCGCAAACCGTCTCTACAACTTCTCAGCCACTTCCAAAGTGGACCCTTCTCTGGATCCAAACTATGCCAAGAAGCTCATGGATTTATGCCCACAAAACGTGGACCCCAGAGTCGCTGTGGACATGGACCCTGTAAGCCCAAAGAAAATGGACAATGTGTATTACCAAAATCTTCAGAACCATAAAGGGCTTTTCACGTCGGATCAAGTGCTTTATACAGACCCATTGTCGCAAGCCACTGTGAGTGGGTTTGCGAATGATCGTAATAGGTTCAATAAAGCGTTTGTAGCAGCTATGGTTCGACTTGGGAGAGTAGGGGTTAAGACTGGGGTTGTGGGTGAGATTAGAAAAGATTGTACTACCTTTAATTAA 978 46.22 MGAMAIRVVLSLALVCMLIAVAQAQLSFNFYNSSCPNVEQIVRQAVSLKISQTFVTIPATLRLFFHDCFVQGCDASVMIASPSGDAEKDSEDNLSLAGDGFDTVVKAKQAVEAQCPGKVSCADILTIAARDVVVLAGGPYFAVELGRRDGLISKASLVAGNLPGPNFNLSQLNTMFAKNNLTQTDMIALSGAHTVGFSHCNRFANRLYNFSATSKVDPSLDPNYAKKLMDLCPQNVDPRVAVDMDPVSPKKMDNVYYQNLQNHKGLFTSDQVLYTDPLSQATVSGFANDRNRFNKAFVAAMVRLGRVGVKTGVVGEIRKDCTTFN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1748680 1751310 - MELO3C008188.2.1 Cme03g00130 322141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00130 325 Gene3D - 29 325 - -
Cme03g00130 325 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 Gene3D Peroxidase, domain 2 163 304 - -
Cme03g00130 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cme03g00130 325 PANTHER PEROXIDASE 8 325 - -
Cme03g00130 325 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PANTHER - 8 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Cme03g00130 325 Pfam Peroxidase 52 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g00130 325 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00128 Cme-Chr3:1727623 Cme03g00130 Cme-Chr3:1748680 2.49E-161 dispersed
Cme03g00130 Cme-Chr3:1748680 Cme11g00354 Cme-Chr11:3632127 5.12E-151 dispersed
Cme03g00129 Cme-Chr3:1748650 Cme03g00130 Cme-Chr3:1748680 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00130 K00430 - csv:101213098 577.785