Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00132 ATGGAAGTTGAATCACAATCAGAGTTCCCGTGCTGGAAGCCCTTCCAACGGAGGTTCGATCCCGATTCTCCCTTTTTTGCCTCTGGAAATGTCGAGCGCGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGCTACAGCTGCATAATATGGCAGTTGATGCTAGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCAAGGCATGCTGCCTCTTGTTCAGTTTGCCCTAGAGTTTACCCGACATCACGCCTACTTAGTTTACATGTCTCTGAGGCGCACGACTCGTTCTTTCAAGCAAAAGTCGCACGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTATAAAAGCAGACACCAGCATCTAGTGGACAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCCCATCCATCTAAGAAACAAAGACAGAAAATGTATCGTAAACAAGCCATTCAAGGAAGGGAAGAAACCTCCAGAATGGAAGTCGAGAATGAAATTATGGATGGCCTCATTTCAGGAGTATCTAAACTAAGTACTTCGGACTCAACTCCTTCGTCAATCAGCTTTGGCCGGAGGCACACTCGAGGGTTAACATTTGTTCCTCGAGCAGTTCAGCGAGAGAAAGTGTCAGACTCCTCAACAGCTGGAACAAAGAGATGA 750 44.13 MEVESQSEFPCWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDASSEIFCPIVGCGAHLKSLDDFEDHYNSRHAASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKMYRKQAIQGREETSRMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVSDSSTAGTKR 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1767815 1769995 + MELO3C008189.2.1 Cme03g00132 322143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00132 249 ProSitePatterns Zinc finger C2H2 type domain signature. 92 113 IPR013087 -
Cme03g00132 249 PANTHER UNCHARACTERIZED 4 238 IPR039258 -
Cme03g00132 249 ProSitePatterns Zinc finger C2H2 type domain signature. 130 153 IPR013087 -
Cme03g00132 249 PANTHER ZINC FINGER PROTEIN 511 4 238 - -
Cme03g00132 249 MobiDBLite consensus disorder prediction 230 249 - -
Cme03g00132 249 SMART c2h2final6 128 153 IPR013087 -
Cme03g00132 249 SMART c2h2final6 90 113 IPR013087 -
Cme03g00132 249 SMART c2h2final6 63 88 IPR013087 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40974 None None None None Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00132 - - csv:101212859 479.944