Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme03g00138 | ATGGAATGGGAAGTGAGGGAGAAATTTACATTGGTGGAATTGGCGGAGAGGGAAGGAAAGATCGAAGAGTTTGTAGTGACGAAAGAGGAAATGGAGATGTACGTTGATCTTCATCCATTGACGAACACTACGTCGTATACAGTAATGGAAAGTATGTCGGTGGCAAAAGCTCTGGTTCTTTTTCGGCAAGTAGGGATTCGTCATTTATTGATCGTCCCCAAATATGAAGCAGCCAGAGTTCTGTTGGTGATTGGGATTTTGACGTGGCAAGATTTAAGGTCATACAATATTTTGAGTGCAATTCCTGATTTAGAAAGGACCAAAGGCAATGAGAAACATAATTGA | 345 | 41.16 | MEWEVREKFTLVELAEREGKIEEFVVTKEEMEMYVDLHPLTNTTSYTVMESMSVAKALVLFRQVGIRHLLIVPKYEAARVLLVIGILTWQDLRSYNILSAIPDLERTKGNEKHN | 114 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1815614 | 1816038 | + | MELO3C008196.2.1 | Cme03g00138 | 322149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme03g00138 | 114 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 2 | 109 | - | - | |
| Cme03g00138 | 114 | SUPERFAMILY | CBS-domain pair | 24 | 94 | IPR046342 | - | |
| Cme03g00138 | 114 | ProSiteProfiles | CBS domain profile. | 41 | 104 | IPR000644 | - | |
| Cme03g00138 | 114 | PANTHER | CHLORIDE CHANNEL PROTEIN | 2 | 109 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme03g00138 | Cme-Chr3:1815614 | Cme06g02178 | Cme-Chr6:27765433 | 1.12E-21 | dispersed | |
| Cme03g00138 | Cme-Chr3:1815614 | Cme03g00139 | Cme-Chr3:1825338 | 1.69E-57 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme03g00138 | K05016 | - | csv:101210008 | 189.889 |