Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00326 ATGGATCCCAACAAATTAAACCTAAATAATTTGGAACAACAACAATCTACTCTAGAGATCCAAACAAAGGAATTTGACTACTCAAAACGCGCACAATGGCTACGCGCTGCAGTACTCGGCGCCAACGACGGCCTTGTCTCGACCGCGTCGCTCATGATGGGAGTTGGAGCTGTCAAACAAGACATCAAGGCCATGATCCTCACCGGTTTCGCCGGTCTAGTAGCTGGCGCCTGTAGTATGGCGATTGGTGAATTTGTGTCTGTTTACTCTCAGCTAGACATTGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGATCAAATAATATGGAAGGAGGTGTAGTACAAGGGCAAGAGAGCAAAGATAAAGAAAAGCTACCAAATCCACTCCAAGCAGCTGCAGCCTCAGCCTTGGCCTTCTCTCTTGGAGCAATGGTCCCATTGTTGGCTGCTTCCTTTATAAGAGAGTACAAAGTAAGACTCGCAGTGGTGGTGGCATCGGTGACTTTAGCTCTCGCCGTGTTCGGGTGGTTGGGTGCCGTTCTTGGAAAAGCATCACCAATCAAATCAGCCGCTAGAGTGTTGGTCGGTGGTTGGTTAGCTATGGCTATAACCTTTGGCTTAACAAAGCTAATCGGAGCGAGTGGACTCTAG 654 47.09 MDPNKLNLNNLEQQQSTLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSNNMEGGVVQGQESKDKEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVASVTLALAVFGWLGAVLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4245196 4246173 - MELO3C008350.2.1 Cme03g00326 322337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00326 217 Pfam VIT family 121 209 IPR008217 GO:0005384|GO:0030026
Cme03g00326 217 Pfam VIT family 34 110 IPR008217 GO:0005384|GO:0030026
Cme03g00326 217 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 19 214 IPR008217 GO:0005384|GO:0030026
Cme03g00326 217 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 19 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00673 Cme-Chr1:5992035 Cme03g00326 Cme-Chr3:4245196 2.23E-51 dispersed
Cme03g00326 Cme-Chr3:4245196 Cme05g00386 Cme-Chr5:3067159 2.06E-91 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00326 K22736 - csv:101204048 380.948