Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00333 ATGGCTGCAACTTCTGGTGCTGTGCTTAATGGATTGGGCTCACCCTTCCTCCGTGGAAGTAGCAGAACTCGGACCTTGCTGGCCGGAGCTAGAGGTGGTGTCAATGTTGTCAGTTCTAGCAAGCTTGTCGTCATCGCTGCTGCTCAGCCTAAGAAGTCTTGGATCCCTGGTGTTAGGGGTGGTGGCAACTTGGTCGACCCAGAATGGCTTGATGGCTCACTTCCAGGTGACTACGGCTTCGACCCATTGGGTTTGGGGAAGGACCCAGCATTTTTGAAGTGGTATAGAGAAGCAGAGCTGATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTCGGACAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTAGGAACCCAGCTTCTGCTGATGGGATGGGTTGAAAGCAAACGATGGGTGGATTTCTTCAACCCAGAATCTCAATCGGTGGAATGGGCAACGCCATGGTCGAGGACGGCAGAGAATTTCGCAAACGCTACCGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTTAAAGATGGGGTTTACATTCCAGACACGGAGAAATTGGAGAGATTGAAGTTGGCAGAAATCAAGCATGCTAGGATCGCCATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAAGGGAAGACACCATTGGGTGCTCTTGGATTGTAA 768 51.69 MAATSGAVLNGLGSPFLRGSSRTRTLLAGARGGVNVVSSSKLVVIAAAQPKKSWIPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4366294 4368292 - MELO3C008358.2.1 Cme03g00333 322344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00333 255 SUPERFAMILY Chlorophyll a-b binding protein 64 255 - -
Cme03g00333 255 Pfam Chlorophyll A-B binding protein 67 243 IPR022796 -
Cme03g00333 255 Gene3D Chlorophyll a/b binding protein domain 67 254 - -
Cme03g00333 255 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 255 - -
Cme03g00333 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 255 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00333 Cme-Chr3:4366294 Cme03g02045 Cme-Chr3:27959543 1.76E-32 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00333 K08917 - csv:101204705 516.153