Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme03g00482 | ATGATCTCTCCTCCGCCGTCCCCGCCTTCGCTTCCACTCCCCTCCTCCGCAAGAAGCGTATGCCCAGAAACCGTCGCCCTTCTTCTTCCTCTTCTTCTTCCTCCTCCTCCAATCTTCCTTCTTTCTCCTTTCCTTCTTCTTCCTCCTCCACTCCCCACCTCCCTTCTCCTCGGGTGCAAAAAAAAAAAAAAAAAAAAAAGGTCGTGGCTTAGGGTAAATGATTCAAGGAAGCTGAAGTTTCTTTTTCAAAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTCAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCAGCTTTGGAGTCCAAAGAAGGAATGATGATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTCAAATACAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGGAGACTTTGTCAATGCTCATGCCTTGCATCTTGGAGATTTCATCATGATTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAAAAGGCTTCGGAGCAAGAAATATATTCCGACATAACAACAAATGATGTTGTGATCAACGAAGACATTGTGTTTCAAGACTACGATGCTAGCAAAGCGGCTAGCTCCATCTACGTGCCTAGTCCAACCATGGAACATCCTGTGTCGTCATTCATCTACGACACTAGTTGTGCCTTCGACAATGATTCACCTTTCGACTTTATGACTGGATCAATGACCAACTACTCAAGAATGGGAGGTCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGAAGATTTCTACTGA | 831 | 43.8 | MISPPPSPPSLPLPSSARSVCPETVALLLPLLLPPPPIFLLSPFLLLPPPLPTSLLLGCKKKKKKKRSWLRVNDSRKLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGMMITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTGDFVNAHALHLGDFIMIYQDCEEHNYVIQAKKASEQEIYSDITTNDVVINEDIVFQDYDASKAASSIYVPSPTMEHPVSSFIYDTSCAFDNDSPFDFMTGSMTNYSRMGGLEGFGSVENLSLEDFY | 276 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7028836 | 7031618 | - | MELO3C027255.2.1 | Cme03g00482 | 322493 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme03g00482 | 276 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 63 | 276 | IPR044800 | GO:0003700 | |
Cme03g00482 | 276 | SMART | B3_2 | 82 | 184 | IPR003340 | GO:0003677 | |
Cme03g00482 | 276 | ProSiteProfiles | B3 DNA-binding domain profile. | 82 | 184 | IPR003340 | GO:0003677 | |
Cme03g00482 | 276 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR FUS3 | 63 | 276 | - | - | |
Cme03g00482 | 276 | SUPERFAMILY | DNA-binding pseudobarrel domain | 80 | 179 | IPR015300 | - | |
Cme03g00482 | 276 | Gene3D | - | 78 | 196 | IPR015300 | - | |
Cme03g00482 | 276 | Pfam | B3 DNA binding domain | 82 | 180 | IPR003340 | GO:0003677 | |
Cme03g00482 | 276 | CDD | B3_DNA | 80 | 182 | IPR003340 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g01723 | Cme-Chr1:24029322 | Cme03g00482 | Cme-Chr3:7028836 | 3.74E-37 | dispersed | |
Cme03g00482 | Cme-Chr3:7028836 | Cme08g00291 | Cme-Chr8:1867762 | 2.78E-30 | dispersed | |
Cme03g00482 | Cme-Chr3:7028836 | Cme09g01901 | Cme-Chr9:23146679 | 1.13E-07 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
40989 | PF02362 | B3 | 6.30E-18 | CL0405 | Cme | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme03g00482 | - | - | cmo:103504182 | 414.846 |