Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00527 ATAAATCTCAGCCGGTCCAACTCCAGTCTCCGATCACGCAGCCACCACGACGCCGAGAGAAAATCCAAACTTCGAAGCAGCTCGGTCCAGTTTCAGTTCCGAAATTGTTCATCAATGTCGGAAGTAATTTCCGTCATGGATATTGACGACGATAATGGCAACAACGAAGCTGAAAAGGCAGTCAAGGGGAAAAACGTTGCCAGTCCTGCCGCCGCACCCGAGGTCAAAGCGATACCCTGGGTTGAGAAGTTCCGGCCTAAGTCTCTCGCTGATGTTGCTGCTCACCGTGACATTGTTGACACCATCGACAAGCTGACCAGTGAGAATAGGCTGCCACATCTCCTGTTGTACGGCCCTCCTGGTACTGGCAAGACATCAACTATTCTAGCGGTTGCTCGCAAGCTTTATGGAACAAACTACCACAATATGATTTTGGAGCTGAACGCATCAGATGATAGAGGGATAGATGTTGTCAGGCAGCAGATTCAGGATTTTGCAAGTACCCAAAGCTTTTCATTTGGGGTAAAAGCGTCTGTAAAATTGGTTCTGTTGGATGAGGCAGATGCCATGACTAAAGATGCACAGTTTGCTTTACGAAGAGTAATTGAGAAATACACAAAAAATACAAGGTTTGCTCTTATCTGTAATCACGTCAATAAGATTATTCCTGCATTACAATCAAGGTGTACCCGCTTTCGATTTGCTCCCCTTGATAACTTTCATGTAACTGAACGACTCAGATACGTTATTGAGGCTGAGAGGTACAGTTTCCCTTGTTTCACTTACAATACATGCATAAATCTCATTATTGCTTCCATTATGTCTAACAAGCAAATATGCAAGTCTTTGATGGTTTTGGACCTACAGTATAAAGATGTTTAG 882 44.1 INLSRSNSSLRSRSHHDAERKSKLRSSSVQFQFRNCSSMSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEVKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERYSFPCFTYNTCINLIIASIMSNKQICKSLMVLDLQYKDV 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7925750 7927398 - MELO3C010631.2.1 Cme03g00527 322538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00527 293 MobiDBLite consensus disorder prediction 1 24 - -
Cme03g00527 293 PANTHER REPLICATION FACTOR C SUBUNIT 5 74 255 - -
Cme03g00527 293 Pfam ATPase family associated with various cellular activities (AAA) 114 235 IPR003959 GO:0005524|GO:0016887
Cme03g00527 293 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 74 255 - -
Cme03g00527 293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 258 IPR027417 -
Cme03g00527 293 MobiDBLite consensus disorder prediction 10 24 - -
Cme03g00527 293 CDD AAA 98 236 - -
Cme03g00527 293 Gene3D - 73 236 IPR027417 -
Cme03g00527 293 SMART AAA_5 110 240 IPR003593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00527 Cme-Chr3:7925750 Cme06g02668 Cme-Chr6:33778714 1.30E-53 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00527 K10756 - csv:101217230 422.935