Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00574 ATGATGTTTCTCATGTCGCTCTCCCTTTTATTATCACTTCTCAATAAGCTGAAGAAGATGATGCATCATATGAGTGAGAATTCTATTGTGCGTAAGTTGAAGCCTTATATTCTAGTGGTGAGCCTACAATTTGGAATTGCAGGCATATATGTAATATGCATGGCCACTCTCACCAAAGGCATGAGTCGTTATGTTTTGATCGTATATCGAAACACTGTTGCCGCTCTCTTTCTTGCTCCATTCGCACTAATTTTCGAAAGGAAAACAAGACCAAAGATGACACTCCCTGTGGCATTACAAATCATGATCTTGGGTTTTCTAGAACCCGTAGTCGATCAAGGGTTTGGTTATCTAGGGATGACATACACGTCAGCATCATTCACATCGGCCATCATGAATGCTGTGCCCTCTGTTACCTTTATCATTGCGGTCCTTTTTCGAGTGGAACGTTTAAATATAAAACAAGTACGAGGGGTAGCCAAGGTAATTGGCACCTTGGTTACCTTCGCCGGAGCTTTGATTATGACACTTTACAAAGGCCCAATTCTCGATTTCTTTTGGACTCAAAAAACCAACCACCACGTTAACAGCGGCGCCGCCGCCACCAATCAACATTGGGTGGCCGGAACGTTGTTCATCCTTCTGGGCTGCGTGGCTTGGTCCTGTTTCTACATATTACAATCTGTAACAGTAAAGAAATATCCGGCGGAGTTGTCTCTCTCAGCACTGATATGCTTGGCTGGTGCACTTCAGAGCACAGTGATAGCAGTAGCTATTGAGCGTCATGCTAGCGCATGGGCTGTGGGCTGGGACTCGAGGCTTCTTGCTCCTCTCTATACGGGAATAGTTGGGTCAGGCATTGCTTATTACTTCCAAGCTCTTGTTATGAAGACTAGAGGTCCTGTCTTTGTGACGGCTTTCAACCCTTTATGTATGATTGTTGTCACCGTTATCTCTTCCATTGTTCTTGCAGAGAAGATTCACCTCGGAAGTGTCATTGGAGGCCTTATCATCGCAATTGGGCTTTATGCAGTCGTTTGGGGTAAAAGTAAGGATTATTCCACCGCCGACCACCTCCAAAAGCCAAACGCCGCCGCCGTACCAGACCTTCCAATCGTTGCCTCTCAACTCCCTGCCGAACAAGAAGCTTATCTTCAACCTTCCAAATGA 1170 45.47 MMFLMSLSLLLSLLNKLKKMMHHMSENSIVRKLKPYILVVSLQFGIAGIYVICMATLTKGMSRYVLIVYRNTVAALFLAPFALIFERKTRPKMTLPVALQIMILGFLEPVVDQGFGYLGMTYTSASFTSAIMNAVPSVTFIIAVLFRVERLNIKQVRGVAKVIGTLVTFAGALIMTLYKGPILDFFWTQKTNHHVNSGAAATNQHWVAGTLFILLGCVAWSCFYILQSVTVKKYPAELSLSALICLAGALQSTVIAVAIERHASAWAVGWDSRLLAPLYTGIVGSGIAYYFQALVMKTRGPVFVTAFNPLCMIVVTVISSIVLAEKIHLGSVIGGLIIAIGLYAVVWGKSKDYSTADHLQKPNAAAVPDLPIVASQLPAEQEAYLQPSK 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8965872 8972615 + MELO3C010598.2.1 Cme03g00574 322585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00574 389 Pfam EamA-like transporter family 209 346 IPR000620 GO:0016020|GO:0016021
Cme03g00574 389 Pfam EamA-like transporter family 46 174 IPR000620 GO:0016020|GO:0016021
Cme03g00574 389 PANTHER WAT1-RELATED PROTEIN 32 361 - -
Cme03g00574 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 69 177 - -
Cme03g00574 389 PANTHER WAT1-RELATED PROTEIN 32 361 IPR030184 GO:0016021|GO:0022857
Cme03g00574 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 266 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00574 Cme-Chr3:8965872 Cme07g00859 Cme-Chr7:8550197 4.98E-138 dispersed
Cme03g00574 Cme-Chr3:8965872 Cme08g02377 Cme-Chr8:30644568 3.24E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00574 - - cmo:103504048 721.079