Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00586 ATGGTGCCTTCGGGGCCATCTACACCCATTGGTGGTGCCCAATCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCACAGTCAGCTTTTCCTTCTCTTGTATCCCCTCGGACACAGTTTAACAATATGAATATGCTTGGTAATACACCCAGTATGTCTTCTCTCCTAAATCAGTCTTTTGTGAATGGGGTTCCGAATTCTGGGCCCTCAGGCCTTGGAAATAGCCAACGAGTAGGTATGGACCCTGGTTCTGAGTCAGATCCATTTTCACTCGTTGGCAATGGTGTGAACTTCAACAATACCCCTTCCTCATTGGTGACATCAAATACAGCAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCAGCAATTTTCAAATCATTCTAGCGGCCAAATCATACCCAATCAACAGCAGTCACAGCAAATTGAACCCCAGAACTTCCAACATAGTCAACATTCAATGCAACAGTTCGCTACGTCGAATAACACGCAGCAGCCACAGCAGCTGCAGCAGCAACAACAACATCAATTCCAACGAGGAAGCTTATGCGGTGTTGGACCTGTCAAGTTAGAACCTCAAATGAATAACAATGATCTCCAAGGACAGCAACTACAGCAGCAGCAGCAGTTGCAGTCAATGAGGAATCTTGGTCCTGTGAAACTGGAACCACAACAACTTCAATCAATGAGAAACATGGGTCCTGTAAAATTGGAACCTCAACAGTCTGATCCGTCATTGTTTCTACAGCAGCAACATCAACATCAACATCAACAGCAACAGCAACAACAGCAGTTACTCAGTATGTCTAGGCAGTCCTCTCAGGCTGCTGCTGCACAGATTAATATTTTGCAACAACAAAGACTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTACCATTGAGATCCCCTGTAAAGTCTGTTTACGAACCTGGCATGTGTGCTCGGCGCTTAACAAATTATATGTGCCAACAGCAGCAAAGGCCTGAAGACAACAATATCGAGTTCTGGAGGAAATTTGTTGCAGATTACTTTGCTCCCCATGCCAAAAAGAAATGGTGCGTTTCAATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGATGTCTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCAACTTTTGAAGTTCTTCCAAGGCTGTTCAAAATCAAGTATGAGAGTGGAACGCTCGAAGAGCTTCTCTATGTTGATATGCCCCGCGAATATCATAATTCATCCGGACAAATTGTCCTAGATTATGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGGATAGTTTTTTCTCCCGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGACGCCATGAAGAGCTTATTCCTCGAAGGTTGCTAATACCTCAGGTTAGTCAGTTGGGTGCAGCTGCTCAGAAGTATCAGACTGCAATTCAAAATGCATCATCAAACTTGCCTACTCCAGAGTTGCAAAATAATTGCAACATGTTTGTGGGGTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTCCGGTGCCTTCAGATATCAGAAGTTGTCAATAGTATGAAGGACTTGATAGACTACAGCCAAGAAACTACGACTGGGCCAATTGAGAGCTTAGCAAAGTTTCCACGAAAGACGAATGCTTCACAAGGCTTCCACAGCCAAACTCAAAATACTGAGCAACAGTTACCTCAGCCTCAGCAAACAAGTGATCAAAACACAAACGGCGATCAAAGCTCTGCTCAGGCTGCTCCGATGCAGCTTGCTGCTAACAATGGCGTTCCTGTTCCAAGTGCAAATAACTCTGCTAATCCAGCATCAACTTCATCTCCCGCCAGTACCATTGTTGGGTTACTCCACCAGAATTCCATGAACTCCAGACAGCAGAACTCTATCAATAGCGCTGGCAGCCCTTATGCTGGAAATTCTGCGCAAATATCGTCTCCAGGTTCCTCAGCAATTGCTCAGGCACAAGCAAACTCCTCGTTCCAATCGCCTGCATTGTCCTCAGCTAACAATCATCCACAATCATCAATTGGCACTGCAACAACTACTAATCACCTGAGTGCCGCTAATTCTCCGGCAAATGTTCCCTTGCAACAGCCTACACAATCTTCCGAAGCCGATCAAAACGAGTCCCAGAGTTCCGTGCAAAAGATTATTCAGGAATACATGATGTCAAATCATCTAAACGGGATGAACACAATGACTGGTGTATCCTCCATAGGAGATGATGCGAAAACTGTTAACGGAGTGTTACCAGGAAACAATGTTATGAGTCTCAATGGACGGAACGGCCTCATCGGAACAGGAAATGCTAATGGCGTTTCTGGAATGAGGAGTGCAGGATATGGTTCAATGGGTGGTGGTGGGGGACTCGTTCAGACTAATGTAGTCAATGGAATGAAGTCTGCAATGGGAAATAACTCGATTTCAAATGGGAGAATTGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAATCATCAAGACTTGGGGGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCAATTTGATTATTGA 2742 44.57 MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFNNMNMLGNTPSMSSLLNQSFVNGVPNSGPSGLGNSQRVGMDPGSESDPFSLVGNGVNFNNTPSSLVTSNTANPGSSSQVSGQQFSNHSSGQIIPNQQQSQQIEPQNFQHSQHSMQQFATSNNTQQPQQLQQQQQHQFQRGSLCGVGPVKLEPQMNNNDLQGQQLQQQQQLQSMRNLGPVKLEPQQLQSMRNMGPVKLEPQQSDPSLFLQQQHQHQHQQQQQQQQLLSMSRQSSQAAAAQINILQQQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKSVYEPGMCARRLTNYMCQQQQRPEDNNIEFWRKFVADYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLPTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETTTGPIESLAKFPRKTNASQGFHSQTQNTEQQLPQPQQTSDQNTNGDQSSAQAAPMQLAANNGVPVPSANNSANPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSAQISSPGSSAIAQAQANSSFQSPALSSANNHPQSSIGTATTTNHLSAANSPANVPLQQPTQSSEADQNESQSSVQKIIQEYMMSNHLNGMNTMTGVSSIGDDAKTVNGVLPGNNVMSLNGRNGLIGTGNANGVSGMRSAGYGSMGGGGGLVQTNVVNGMKSAMGNNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLQFDY 913
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9213697 9225706 + MELO3C010585.2.1 Cme03g00586 322597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00586 913 MobiDBLite consensus disorder prediction 67 187 - -
Cme03g00586 913 MobiDBLite consensus disorder prediction 67 91 - -
Cme03g00586 913 Pfam LIM-domain binding protein 345 599 IPR029005 -
Cme03g00586 913 MobiDBLite consensus disorder prediction 1 41 - -
Cme03g00586 913 MobiDBLite consensus disorder prediction 606 672 - -
Cme03g00586 913 MobiDBLite consensus disorder prediction 245 278 - -
Cme03g00586 913 MobiDBLite consensus disorder prediction 8 41 - -
Cme03g00586 913 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 913 - -
Cme03g00586 913 PANTHER LIM DOMAIN-BINDING PROTEIN 1 913 IPR029005 -
Cme03g00586 913 MobiDBLite consensus disorder prediction 684 776 - -
Cme03g00586 913 MobiDBLite consensus disorder prediction 252 278 - -
Cme03g00586 913 MobiDBLite consensus disorder prediction 100 187 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00421 Cme-Chr3:5822509 Cme03g00586 Cme-Chr3:9213697 0 dispersed
Cme03g00586 Cme-Chr3:9213697 Cme06g00971 Cme-Chr6:6902210 3.27E-114 dispersed
Cme03g00586 Cme-Chr3:9213697 Cme09g01449 Cme-Chr9:19708414 3.11E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00586 - - csv:101221714 1498.8