Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme03g00586 | ATGGTGCCTTCGGGGCCATCTACACCCATTGGTGGTGCCCAATCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCACAGTCAGCTTTTCCTTCTCTTGTATCCCCTCGGACACAGTTTAACAATATGAATATGCTTGGTAATACACCCAGTATGTCTTCTCTCCTAAATCAGTCTTTTGTGAATGGGGTTCCGAATTCTGGGCCCTCAGGCCTTGGAAATAGCCAACGAGTAGGTATGGACCCTGGTTCTGAGTCAGATCCATTTTCACTCGTTGGCAATGGTGTGAACTTCAACAATACCCCTTCCTCATTGGTGACATCAAATACAGCAAACCCTGGTTCATCTAGTCAAGTTTCAGGGCAGCAATTTTCAAATCATTCTAGCGGCCAAATCATACCCAATCAACAGCAGTCACAGCAAATTGAACCCCAGAACTTCCAACATAGTCAACATTCAATGCAACAGTTCGCTACGTCGAATAACACGCAGCAGCCACAGCAGCTGCAGCAGCAACAACAACATCAATTCCAACGAGGAAGCTTATGCGGTGTTGGACCTGTCAAGTTAGAACCTCAAATGAATAACAATGATCTCCAAGGACAGCAACTACAGCAGCAGCAGCAGTTGCAGTCAATGAGGAATCTTGGTCCTGTGAAACTGGAACCACAACAACTTCAATCAATGAGAAACATGGGTCCTGTAAAATTGGAACCTCAACAGTCTGATCCGTCATTGTTTCTACAGCAGCAACATCAACATCAACATCAACAGCAACAGCAACAACAGCAGTTACTCAGTATGTCTAGGCAGTCCTCTCAGGCTGCTGCTGCACAGATTAATATTTTGCAACAACAAAGACTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTACCATTGAGATCCCCTGTAAAGTCTGTTTACGAACCTGGCATGTGTGCTCGGCGCTTAACAAATTATATGTGCCAACAGCAGCAAAGGCCTGAAGACAACAATATCGAGTTCTGGAGGAAATTTGTTGCAGATTACTTTGCTCCCCATGCCAAAAAGAAATGGTGCGTTTCAATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGATGTCTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCAACTTTTGAAGTTCTTCCAAGGCTGTTCAAAATCAAGTATGAGAGTGGAACGCTCGAAGAGCTTCTCTATGTTGATATGCCCCGCGAATATCATAATTCATCCGGACAAATTGTCCTAGATTATGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGGATAGTTTTTTCTCCCGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGACGCCATGAAGAGCTTATTCCTCGAAGGTTGCTAATACCTCAGGTTAGTCAGTTGGGTGCAGCTGCTCAGAAGTATCAGACTGCAATTCAAAATGCATCATCAAACTTGCCTACTCCAGAGTTGCAAAATAATTGCAACATGTTTGTGGGGTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATACGTCCGGTGCCTTCAGATATCAGAAGTTGTCAATAGTATGAAGGACTTGATAGACTACAGCCAAGAAACTACGACTGGGCCAATTGAGAGCTTAGCAAAGTTTCCACGAAAGACGAATGCTTCACAAGGCTTCCACAGCCAAACTCAAAATACTGAGCAACAGTTACCTCAGCCTCAGCAAACAAGTGATCAAAACACAAACGGCGATCAAAGCTCTGCTCAGGCTGCTCCGATGCAGCTTGCTGCTAACAATGGCGTTCCTGTTCCAAGTGCAAATAACTCTGCTAATCCAGCATCAACTTCATCTCCCGCCAGTACCATTGTTGGGTTACTCCACCAGAATTCCATGAACTCCAGACAGCAGAACTCTATCAATAGCGCTGGCAGCCCTTATGCTGGAAATTCTGCGCAAATATCGTCTCCAGGTTCCTCAGCAATTGCTCAGGCACAAGCAAACTCCTCGTTCCAATCGCCTGCATTGTCCTCAGCTAACAATCATCCACAATCATCAATTGGCACTGCAACAACTACTAATCACCTGAGTGCCGCTAATTCTCCGGCAAATGTTCCCTTGCAACAGCCTACACAATCTTCCGAAGCCGATCAAAACGAGTCCCAGAGTTCCGTGCAAAAGATTATTCAGGAATACATGATGTCAAATCATCTAAACGGGATGAACACAATGACTGGTGTATCCTCCATAGGAGATGATGCGAAAACTGTTAACGGAGTGTTACCAGGAAACAATGTTATGAGTCTCAATGGACGGAACGGCCTCATCGGAACAGGAAATGCTAATGGCGTTTCTGGAATGAGGAGTGCAGGATATGGTTCAATGGGTGGTGGTGGGGGACTCGTTCAGACTAATGTAGTCAATGGAATGAAGTCTGCAATGGGAAATAACTCGATTTCAAATGGGAGAATTGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAATCATCAAGACTTGGGGGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCAATTTGATTATTGA | 2742 | 44.57 | MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFNNMNMLGNTPSMSSLLNQSFVNGVPNSGPSGLGNSQRVGMDPGSESDPFSLVGNGVNFNNTPSSLVTSNTANPGSSSQVSGQQFSNHSSGQIIPNQQQSQQIEPQNFQHSQHSMQQFATSNNTQQPQQLQQQQQHQFQRGSLCGVGPVKLEPQMNNNDLQGQQLQQQQQLQSMRNLGPVKLEPQQLQSMRNMGPVKLEPQQSDPSLFLQQQHQHQHQQQQQQQQLLSMSRQSSQAAAAQINILQQQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKSVYEPGMCARRLTNYMCQQQQRPEDNNIEFWRKFVADYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLPTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETTTGPIESLAKFPRKTNASQGFHSQTQNTEQQLPQPQQTSDQNTNGDQSSAQAAPMQLAANNGVPVPSANNSANPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSAQISSPGSSAIAQAQANSSFQSPALSSANNHPQSSIGTATTTNHLSAANSPANVPLQQPTQSSEADQNESQSSVQKIIQEYMMSNHLNGMNTMTGVSSIGDDAKTVNGVLPGNNVMSLNGRNGLIGTGNANGVSGMRSAGYGSMGGGGGLVQTNVVNGMKSAMGNNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLQFDY | 913 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9213697 | 9225706 | + | MELO3C010585.2.1 | Cme03g00586 | 322597 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme03g00586 | 913 | MobiDBLite | consensus disorder prediction | 67 | 187 | - | - | |
Cme03g00586 | 913 | MobiDBLite | consensus disorder prediction | 67 | 91 | - | - | |
Cme03g00586 | 913 | Pfam | LIM-domain binding protein | 345 | 599 | IPR029005 | - | |
Cme03g00586 | 913 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Cme03g00586 | 913 | MobiDBLite | consensus disorder prediction | 606 | 672 | - | - | |
Cme03g00586 | 913 | MobiDBLite | consensus disorder prediction | 245 | 278 | - | - | |
Cme03g00586 | 913 | MobiDBLite | consensus disorder prediction | 8 | 41 | - | - | |
Cme03g00586 | 913 | PANTHER | LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED | 1 | 913 | - | - | |
Cme03g00586 | 913 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 1 | 913 | IPR029005 | - | |
Cme03g00586 | 913 | MobiDBLite | consensus disorder prediction | 684 | 776 | - | - | |
Cme03g00586 | 913 | MobiDBLite | consensus disorder prediction | 252 | 278 | - | - | |
Cme03g00586 | 913 | MobiDBLite | consensus disorder prediction | 100 | 187 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g00421 | Cme-Chr3:5822509 | Cme03g00586 | Cme-Chr3:9213697 | 0 | dispersed | |
Cme03g00586 | Cme-Chr3:9213697 | Cme06g00971 | Cme-Chr6:6902210 | 3.27E-114 | dispersed | |
Cme03g00586 | Cme-Chr3:9213697 | Cme09g01449 | Cme-Chr9:19708414 | 3.11E-116 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme03g00586 | - | - | csv:101221714 | 1498.8 |