Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00609 AAAAATAATAATAAATATATATATATATATATATTTTTAAAAAATGTTTGTTGTGTGTGTATTTATTTTAATTTATTTTTGCCCTTTGTTTCGTTTTGTGCTGTAATTTGGAAAGGAGGAGCGTCCCTCCCAATTAGCCTTATTATTATTCTCTCTATGCTTGGAGACTCCATTACTTCCGTCTTGGGCGGCGGCGCCGGAGGAGATGCCGCCGTACCGGCGACGACGACGCGTCGTCAAGATGGGCTCATGGGGGACATGGATGAGAATAATAACAATTCTGGTGAAGATGAGAGAGGGAGAAGCAGCGGTGGTGGAGGTGACGACGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACTTTAGCTCTCTTGAAAATACGGTCAGAAATGGACGTGGCTTTTCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAGCAAATTTCCAGGAAATTGGGGGAGCTTGGGTATCATCGAAGTGCAAAGAAATGCAAAGAGAAATTTGAGAATGTTTACAAATATCACAAAAGAACTAAAGAAGTTAGAAGTGGGAAACCAGATAGCAAAACTTATAAGTTCTTCGAACAATTGGAAGCTCTAGAAAATCACCCTCCTCTTAATTTCCACTCCCATTTGTCTAAACCAACTCCTCCGCCACCCCTACCGCCGCCGCCTACTACCGTCATTTCCCACATTCCTTCTACTACTGTTCCATCCGCCACCACCACCACCCTACCTCACTTATTGAACATATCGTTTTCTCAACCAAACCCCACAATTCACCTCCCATCTCCTCCGCCGCCTCCCGCTCCGTTGCCATTGAATAACCCTACAAGTTTTCCCACCACCGTCCCTCCCGCTGTCCCTTTCCAAATCAATGTCTCTTCCACGGGAATGGGAATGGGGTTTCAAAGCATTGAAGCGGATCTCATCTCGAACTCGACTTCTGATGATGTCAACTCGTCCACATCATCAGACGAGGCGTCAAGACGGAGGAGGAGGAAGAGAAAATGGAAGGACTTTTTTGAGAGATTGATGAAGGAAGTGATTGAAAAACAAGAGGAAATGCAAAAGAGGTTCTTGGAAGCAATTGAGAAGAGGGAACAAGAGAGAGTTTTGAGAGAAGAAGCTTGGAGGATGCAAGAGATGGCCAAAATCAATAGAGAAAGAGAGATTTTAGCTCAAGAGAGATCAATGGCGGCTGCAAAAGATGCCGCCATTACATCCTTCCTTCAAAAAATAACTGAATCCCAGCACAACAATAACAACAACACATCACAACCGTCGCCGCCACCGCCGCCACCAGCACCACCATCGCAGCAACAACAAATTCCAACGTCAAATCCGACACCAGTTGTGCATCCACAACAGCAGCTGCAACCACCACCGCCGCCCGCACCACAAGCTTCCACATTGCAAGTGGTTGTTCCTAATTCCACCCCACAAAAAGTGGGGAGTAATAATGAATTGTTGCAAATGGAGATAATGAAGATGGATCATAATGGTGGGGAGAATTATAGCATTAGCCCAGCTTCAAGCTCATCAAGATGGCCAAAAGTTGAAGTTCAAGCACTCATCAAATTGAGAACAAACCTTGAGACCAAATATCAAGAGAATGGGCCAAAAGGGCCATTGTGGGAAGAGATATCATCAGCCATGAAGAAACTTGGGTACAATAGAAATGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAATACTTCAAGAAAGTGAAAGAAAGTAGAAAAACAAGGCCTGAGGACTCCAAGACTTGCCCTTATTTTCACCAGCTCGATGCTTTGTATAGGGAAAAGAGCAACAACAACAACAACAACATGATGGCATCTTCTACGCCGATTATGCAACATCAACAGCAGCCATTGATGGTTCGACCTGAGCAACAATGGCCTCCTCAACAAGAGATCACTCGACCTGACTCGGGAAATGAGGAAATGGAGAGCGAACCAATGGATCGTGATGATAAAGACGATGACGAAGAAGATGAAGAGGAAGAGGAAGAGGATGAAGGTGGAGGGAACTATGAGATTGTGGCGAGCAAACCGGCTTCCGTGACTGCTGCAGAGTGA 2100 45.33 KNNNKYIYIYIFLKNVCCVCIYFNLFLPFVSFCAVIWKGGASLPISLIIILSMLGDSITSVLGGGAGGDAAVPATTTRRQDGLMGDMDENNNNSGEDERGRSSGGGGDDGDRSFGGNRWPRQETLALLKIRSEMDVAFRDASVKGPLWEQISRKLGELGYHRSAKKCKEKFENVYKYHKRTKEVRSGKPDSKTYKFFEQLEALENHPPLNFHSHLSKPTPPPPLPPPPTTVISHIPSTTVPSATTTTLPHLLNISFSQPNPTIHLPSPPPPPAPLPLNNPTSFPTTVPPAVPFQINVSSTGMGMGFQSIEADLISNSTSDDVNSSTSSDEASRRRRRKRKWKDFFERLMKEVIEKQEEMQKRFLEAIEKREQERVLREEAWRMQEMAKINREREILAQERSMAAAKDAAITSFLQKITESQHNNNNNTSQPSPPPPPPAPPSQQQQIPTSNPTPVVHPQQQLQPPPPPAPQASTLQVVVPNSTPQKVGSNNELLQMEIMKMDHNGGENYSISPASSSSRWPKVEVQALIKLRTNLETKYQENGPKGPLWEEISSAMKKLGYNRNAKRCKEKWENINKYFKKVKESRKTRPEDSKTCPYFHQLDALYREKSNNNNNNMMASSTPIMQHQQQPLMVRPEQQWPPQQEITRPDSGNEEMESEPMDRDDKDDDEEDEEEEEEDEGGGNYEIVASKPASVTAAE 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9795534 9798858 - MELO3C011694.2.1 Cme03g00609 322620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00609 699 MobiDBLite consensus disorder prediction 625 699 - -
Cme03g00609 699 MobiDBLite consensus disorder prediction 429 447 - -
Cme03g00609 699 Gene3D - 119 180 - -
Cme03g00609 699 Gene3D - 520 581 - -
Cme03g00609 699 MobiDBLite consensus disorder prediction 77 118 - -
Cme03g00609 699 MobiDBLite consensus disorder prediction 625 649 - -
Cme03g00609 699 MobiDBLite consensus disorder prediction 316 338 - -
Cme03g00609 699 MobiDBLite consensus disorder prediction 421 474 - -
Cme03g00609 699 MobiDBLite consensus disorder prediction 92 106 - -
Cme03g00609 699 Pfam Myb/SANT-like DNA-binding domain 117 203 IPR044822 -
Cme03g00609 699 Pfam Myb/SANT-like DNA-binding domain 518 605 IPR044822 -
Cme03g00609 699 CDD GT1 117 182 - -
Cme03g00609 699 MobiDBLite consensus disorder prediction 458 473 - -
Cme03g00609 699 ProSiteProfiles Myb-like domain profile. 117 175 IPR001005 -
Cme03g00609 699 MobiDBLite consensus disorder prediction 657 683 - -
Cme03g00609 699 ProSiteProfiles Myb-like domain profile. 512 576 IPR001005 -
Cme03g00609 699 MobiDBLite consensus disorder prediction 214 229 - -
Cme03g00609 699 PANTHER - 80 692 - -
Cme03g00609 699 SMART sant 516 578 IPR001005 -
Cme03g00609 699 SMART sant 115 177 IPR001005 -
Cme03g00609 699 MobiDBLite consensus disorder prediction 208 229 - -
Cme03g00609 699 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 80 692 - -
Cme03g00609 699 Coils Coil 342 373 - -
Cme03g00609 699 CDD GT1 519 583 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00609 Cme-Chr3:9795534 Cme09g01908 Cme-Chr9:23225738 2.47E-21 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
40996 PF13837 Myb_DNA-bind_4 3.50E-21 CL0123 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00609 - - csv:101205810 982.63