Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00725 ATGGCTACTGATCAGCTCCACCTTCTCACCGTTCTTGACCGTGCAAAGACCCAATTCTACCACTTCACAGCGGTGGTAATCGCCGGAATGGGCTTCTTCACCGATTCCTACGATCTCTTCTGCATATCCCTCGTCACCAAACTCCTCGGCCGCATTTACTACACTGTCGAAGGCTCCTCCCGTCCAGGAACCCTCCCTCCGGCCGTCGCCGCAGCTGTCAACGGCGTCGCACTCGCCGGCACTCTCGCCGGTCAACTCTTCTTCGGCTGGCTCGGTGACAAGCTCGGCCGCAAGCGCGTTTACGGCCTCACCCTCATCCTCATGGTCGTCTGTTCCATCGCATCCGGTCTCTCCTTCAGCAGCTCTCCGACTGCCGTCATCACCACACTCTGTTTTTTCCGATTCTGGCTCGGCTTCGGTATCGGCGGAGATTACCCTTTATCCGCCACCATAATGGCAGAATACTCCAATAAGAAAACTCGAGGCGCATTTATCGCCGCCGTCTTCGCAATGCAGGGGTTCGGAATTCTCGCTGGCGGCACGGTAGCGATCGTAATTTCCTTAATTTTCAAGACCATTTTCAAAGCTCCGCCGTACTCGGTGGACGCCGTGAAATCGACGGTGCCAGAAGCGGATTACGTATGGAGGATTATATTGATGTTGGGTTCCTTGCCGGCGCTTTTAACATACTATTGGCGGATGAAAATGCCGGAAACGCCGCGTTACACTGCCTTGGTTGCCAACGACAATAAGAAAGCTTGTGCTGACATGTCGAAGGTGTTGAATGTGAAAATCGCTCAAAATGTGGTAAATGAGACTCAAAGTAACACAAATGCAAATTCAAACTTTGGGTTTTTTAGTAAGAAATTTCTGAAGAGACATGGGATTCATCTCTTAGGGACTGCCACCACTTGGTTTCTAATCGATGTAGCTTATTATAGCCAAAATTTATTCCAAAAGGACATTTTTAGTGCTGTGGGTTGGTTGCCACCGGCCAAAACAATGAGTGCTTTAGAAGAGGTTTTCAAAGTCGCTAAGGCTCAGACACTCATTGCCCTTTGTGGGACGGTTCCTGGCTATTGGGCCACGGTTCTTCTCATAGACCGGGTTGGTCGGTTCTTTATTCAAGTGGTTGGATTTTTCTTCATGACGGTTTTTATGTTTGCGCTTGCAATTCCTTACCATCATTGGACCGGGAACCATGTGGGGTTTGTTTTGATGTATGGGCTTACGTTTTTCTTTGCTAATTTTGGACCCAATAGTACTACTTTTGTTGTCCCTGCTGAGATTTTTCCGGCTCGGTTTCGGTCAACTTGTCATGGGATATCGGCTGCAGCTGGGAAAGCTGGGGCGATTGTTGGAGCTTTTGGGTTCTTGTATGCTGCTCAGAGTCAAGACCCGTCGAAGACCGATCTGGGTTACCCACCCGGGATTGGAATGAGGAATTCTTTGATCATTTTGGGAATTGTCAATGTGTTTGGGTTACTTTTTAGCTTTTTGGTTCCGGAATCTAAAGGGAAGTCTTTAGAAGAAATGTCCAAAGAGAATGAAGTTGGAGATCACGAAGAAGAAAACCAAGAAAGTAGAGTCGAACAGGTTTAG 1602 48.44 MATDQLHLLTVLDRAKTQFYHFTAVVIAGMGFFTDSYDLFCISLVTKLLGRIYYTVEGSSRPGTLPPAVAAAVNGVALAGTLAGQLFFGWLGDKLGRKRVYGLTLILMVVCSIASGLSFSSSPTAVITTLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGAFIAAVFAMQGFGILAGGTVAIVISLIFKTIFKAPPYSVDAVKSTVPEADYVWRIILMLGSLPALLTYYWRMKMPETPRYTALVANDNKKACADMSKVLNVKIAQNVVNETQSNTNANSNFGFFSKKFLKRHGIHLLGTATTWFLIDVAYYSQNLFQKDIFSAVGWLPPAKTMSALEEVFKVAKAQTLIALCGTVPGYWATVLLIDRVGRFFIQVVGFFFMTVFMFALAIPYHHWTGNHVGFVLMYGLTFFFANFGPNSTTFVVPAEIFPARFRSTCHGISAAAGKAGAIVGAFGFLYAAQSQDPSKTDLGYPPGIGMRNSLIILGIVNVFGLLFSFLVPESKGKSLEEMSKENEVGDHEEENQESRVEQV 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13193358 13194959 + MELO3C011590.2.1 Cme03g00725 322736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00725 533 Gene3D MFS general substrate transporter like domains 20 530 IPR036259 -
Cme03g00725 533 TIGRFAM 2A0109: phosphate:H+ symporter 12 515 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cme03g00725 533 Pfam Sugar (and other) transporter 26 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cme03g00725 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 506 IPR020846 GO:0022857
Cme03g00725 533 PANTHER PHOSPHATE TRANSPORTER, PUTATIVE-RELATED 3 524 - -
Cme03g00725 533 CDD MFS_PhT 25 505 - -
Cme03g00725 533 MobiDBLite consensus disorder prediction 509 533 - -
Cme03g00725 533 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 524 - -
Cme03g00725 533 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00725 Cme-Chr3:13193358 Cme05g00564 Cme-Chr5:5659701 0 dispersed
Cme03g00725 Cme-Chr3:13193358 Cme04g00976 Cme-Chr4:13173820 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00725 K08176 - csv:101205342 993.416