Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00783 ATGCAGAGCTTTGAAAACCCAGAACAGTTCTATGCCCATTCTTCTTCTTCTTCAATCTTTCTTCGGGGAGATGATAGTGGAAGATTTCATACGCGTTTTCTTCCGGACATTGAGGAACTTCAACAATCCGCTGCTGCTATTGCTACTTTTCATCAAGATGATGCTGTTGATTTAAGCCCAAGCTCTGTTTTCGGTTTAAAATCGACCCACAATACAGCTTTTCCAATCCACCTACCGTACGGGAACACGGATGTGGGTTCCATAGGACGAAGGGGGTATTTAGATACAGGACAGGAATTGATGCGGTTGAAAAGGGTGGCTCCGCCGCATTCGCTGGCGGTGACGGTCGCAGCTTCGTCATCGTTGGGAAACGGGAGCTTTGAGAACTGGGGAGAGTCAGCCATGGCAGATAATAGCCAACAGACTGACACTTCCACAGATATCGACAATGATGAAAGACACCAGTTCCAAGGAGCTGTACATGGAGCTCTCATGGCGGTGGACTCCATGGATCAATCTAAAGCAAAATCGGCAGATCAAAAGTTCTTGAAACTTCAATATGTAACCATTGAAATCTTTTATCAGACTCTTCGTCGACTTGCTCAAAATCGAGAAGCAGCGAGGAAGAGTCGACTGAGGAAAAAAGCATATGTCCAGCAGCTGGAAAATAGTAGACAGAGGCTTGCGCAGCTAGAGCAGGAGCTTCATCGAGCACGTCAACAGGGCATTTTTGTGACTTCTGGGGTAGGAGACCATTGTGCATCGATGGCAGGAAATGGTGCCTTGGCATTTGATCTTGACTATGCACGTTGGCTTGATGAGCATCAACGGCTTATCAATGATTTGAGAGCTTCGGCAAATTCTCAGCTGGGGGACGACGAATTGAGATTTCTTGTTGATGGGGTGATGACTCATTATGATGAACTCTTTAGGCTGAAAAGTGTAGGTGCTAAGGCCGATGTATTCCACATTCTATCGGGGATGTGGAAGACTCCTGCTGAGAGGTGTTTCATGTGGTTGGGAGGATTTCGTTCGTCCGAGCTTCTAAAGATAGTAGGGAGCCATTTGGAGCCTTTAACAGATCAGCAATTGATGGGTATATGCAATTTGCAGCAATCTTCTCAACAAGCTGAAGATGCGTTGTCACAAGGCATTGAAGCTTTGCAACAATCTCTTGTAGAAACTCTTTCCTCTGCTTCTTTAGGGCCAGCCAGTTCAGGAAATGTCGCTGATTACATGGGCCAAATGGCGATTGCAATGAGCAAGCTAACTACGCTTGAGAACTTTCTACATCAGGCTGATCTTCTGAGGCAGCAAACACTCCAACAGATGCATCGGATATTAACTACTCGTCAAGCTGCACGAGCATTACTTGTGATCAGTGATTACATTTCACGTCTTCGAGCTCTCAGTTCTCTTTGGTTAGCACGACCGAAAGAGTGA 1443 46.02 MQSFENPEQFYAHSSSSSIFLRGDDSGRFHTRFLPDIEELQQSAAAIATFHQDDAVDLSPSSVFGLKSTHNTAFPIHLPYGNTDVGSIGRRGYLDTGQELMRLKRVAPPHSLAVTVAASSSLGNGSFENWGESAMADNSQQTDTSTDIDNDERHQFQGAVHGALMAVDSMDQSKAKSADQKFLKLQYVTIEIFYQTLRRLAQNREAARKSRLRKKAYVQQLENSRQRLAQLEQELHRARQQGIFVTSGVGDHCASMAGNGALAFDLDYARWLDEHQRLINDLRASANSQLGDDELRFLVDGVMTHYDELFRLKSVGAKADVFHILSGMWKTPAERCFMWLGGFRSSELLKIVGSHLEPLTDQQLMGICNLQQSSQQAEDALSQGIEALQQSLVETLSSASLGPASSGNVADYMGQMAIAMSKLTTLENFLHQADLLRQQTLQQMHRILTTRQAARALLVISDYISRLRALSSLWLARPKE 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14620221 14623678 - MELO3C011550.2.1 Cme03g00783 322794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00783 480 Gene3D - 195 244 - -
Cme03g00783 480 MobiDBLite consensus disorder prediction 128 149 - -
Cme03g00783 480 SUPERFAMILY Leucine zipper domain 197 238 IPR046347 GO:0003700|GO:0006355
Cme03g00783 480 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 237 IPR004827 GO:0003700|GO:0006355
Cme03g00783 480 SMART brlzneu 191 258 IPR004827 GO:0003700|GO:0006355
Cme03g00783 480 ProSiteProfiles DOG1 domain profile. 261 477 IPR025422 GO:0006351|GO:0043565
Cme03g00783 480 Coils Coil 214 241 - -
Cme03g00783 480 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 52 480 - -
Cme03g00783 480 MobiDBLite consensus disorder prediction 128 145 - -
Cme03g00783 480 Pfam Seed dormancy control 279 352 IPR025422 GO:0006351|GO:0043565
Cme03g00783 480 PANTHER TRANSCRIPTION FACTOR TGA9 52 480 - -
Cme03g00783 480 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 198 213 IPR004827 GO:0003700|GO:0006355
Cme03g00783 480 Pfam bZIP transcription factor 197 234 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00783 Cme-Chr3:14620221 Cme10g00013 Cme-Chr10:143381 1.01E-159 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41007 PF14144 DOG1 1.60E-29 No_clan Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00783 K14431 - csv:101210308 865.529