Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme03g00995 | ATGGCGGTCGCTTTCCCAGATGTCAAGTCAGCGTCAGGTTTGAAGGAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCTAAGGACGATGTTACCGTTTACGAAGCGCTCTCCAAACCCGTATACAGCGAATATGTTAACGTGTCTAGGTGGTCCAATCACATCGAAGCACTTTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTGGACGCAGTTGCAACCCCACCGGCTGCTGATGCAAAGGTTGCCGATGACGATGACATGGATCTGTTTGGAGAAGAGACCGAAGAGGAGAAGAAGGCTGCTGAGGAGCGCGCTGCTTCCATCAAGGCTTCTTCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGGAGCGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTTGTCCCTGTTGGATATGGCATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGATAATCTCATTGAGGAACATCTGACAGCTGAACCCATAAATGAGCATGTTCAGAGCTGTGACATCGTTGCCTTCAACAAAATATAA | 660 | 45.91 | MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKVADDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 18874213 | 18876973 | + | MELO3C020023.2.1 | Cme03g00995 | 323006 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme03g00995 | 219 | Gene3D | - | 123 | 219 | IPR014717 | - | |
Cme03g00995 | 219 | Pfam | EF-1 guanine nucleotide exchange domain | 132 | 219 | IPR014038 | GO:0003746|GO:0006414 | |
Cme03g00995 | 219 | Gene3D | - | 4 | 75 | - | - | |
Cme03g00995 | 219 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 1 | 219 | - | - | |
Cme03g00995 | 219 | SUPERFAMILY | eEF-1beta-like | 127 | 219 | IPR036219 | - | |
Cme03g00995 | 219 | SMART | EF1_GNE_2 | 130 | 219 | IPR014038 | GO:0003746|GO:0006414 | |
Cme03g00995 | 219 | Coils | Coil | 102 | 122 | - | - | |
Cme03g00995 | 219 | PANTHER | ELONGATION FACTOR 1-DELTA 1-RELATED | 1 | 219 | - | - | |
Cme03g00995 | 219 | SUPERFAMILY | GST C-terminal domain-like | 11 | 69 | IPR036282 | - | |
Cme03g00995 | 219 | CDD | EF1B | 133 | 219 | IPR014038 | GO:0003746|GO:0006414 | |
Cme03g00995 | 219 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 94 | 102 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Cme03g00995 | 219 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 208 | 219 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g00995 | Cme-Chr3:18874213 | Cme12g01596 | Cme-Chr12:23248218 | 7.03E-111 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme03g00995 | K03232 | - | csv:101215827 | 346.665 |