Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g00995 ATGGCGGTCGCTTTCCCAGATGTCAAGTCAGCGTCAGGTTTGAAGGAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCTAAGGACGATGTTACCGTTTACGAAGCGCTCTCCAAACCCGTATACAGCGAATATGTTAACGTGTCTAGGTGGTCCAATCACATCGAAGCACTTTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTGGACGCAGTTGCAACCCCACCGGCTGCTGATGCAAAGGTTGCCGATGACGATGACATGGATCTGTTTGGAGAAGAGACCGAAGAGGAGAAGAAGGCTGCTGAGGAGCGCGCTGCTTCCATCAAGGCTTCTTCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGGAGCGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTTGTCCCTGTTGGATATGGCATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTTGATAATCTCATTGAGGAACATCTGACAGCTGAACCCATAAATGAGCATGTTCAGAGCTGTGACATCGTTGCCTTCAACAAAATATAA 660 45.91 MAVAFPDVKSASGLKELDEYLLSRSYISGYQPSKDDVTVYEALSKPVYSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKVADDDDMDLFGEETEEEKKAAEERAASIKASSKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLTAEPINEHVQSCDIVAFNKI 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 18874213 18876973 + MELO3C020023.2.1 Cme03g00995 323006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g00995 219 Gene3D - 123 219 IPR014717 -
Cme03g00995 219 Pfam EF-1 guanine nucleotide exchange domain 132 219 IPR014038 GO:0003746|GO:0006414
Cme03g00995 219 Gene3D - 4 75 - -
Cme03g00995 219 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 219 - -
Cme03g00995 219 SUPERFAMILY eEF-1beta-like 127 219 IPR036219 -
Cme03g00995 219 SMART EF1_GNE_2 130 219 IPR014038 GO:0003746|GO:0006414
Cme03g00995 219 Coils Coil 102 122 - -
Cme03g00995 219 PANTHER ELONGATION FACTOR 1-DELTA 1-RELATED 1 219 - -
Cme03g00995 219 SUPERFAMILY GST C-terminal domain-like 11 69 IPR036282 -
Cme03g00995 219 CDD EF1B 133 219 IPR014038 GO:0003746|GO:0006414
Cme03g00995 219 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 94 102 IPR001326 GO:0003746|GO:0005853|GO:0006414
Cme03g00995 219 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 208 219 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g00995 Cme-Chr3:18874213 Cme12g01596 Cme-Chr12:23248218 7.03E-111 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g00995 K03232 - csv:101215827 346.665