Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01035 ATGGCTGATTTAGGATCCAAAACAGTTTTGATTTTGACTTTGGGTATCTTTTTGCTCTTTTTGGGCAATGTCTCAGCTCAACTTTCTACTGGTTTTTACTCTTCTTCTTGTCCAAATTTGTTGTCCACTGTCAAATCTTCTGTTCGTTCTGCTGTCTCAAGTGAAGCTCGCATGGGAGCTTCAATTCTTCGCTTGTTTTTTCATGATTGTTTCGTCAATGGTTGCGACGGGTCGATTTTGTTAGATGATACGTCGAGCTTTACCGGAGAGAAAAGTGCTAACCCCAACAGAAACTCTGCTAGAGGCTTTGATGTTATTGATAATATTAAAACCGCTGTCGAAAATGCTTGTCCTGGTGTTGTTTCTTGCGCTGATATTCTCGCTATTGCGGCTCGTGATTCTGTCGTTTTTCTAGGAGGGCCGAGTTGGAATGTGAAGTTGGGAAGAAGAGACTCCACAACCGCGAGCCAATCCCAAGCGAACAATGACATCCCCGGGCCAAATTCAAGTCTAAGCCAACTCAGCTCTAGATTTAGTGCTCTTGGACTCTCCAACACTGACTTGGTCGCTCTTTCAGGCGGGCACACGATCGGACAAGCGCGTTGCACAACATTTAGAAGCAGAATATACAGCAACAGCTCAAACATTGAGAGTTTATTTGCAAGAACAAGGCAAAGCAACTGCCCCAATACCTCAGGAAGTGGAGACAATAATTTGGCTCCTTTGGATTTGCAAACTCCAAACTCATTTGACAACAACTACTTCAAGAATCTTGTTCAAAACAAGGGCCTCTTACAATCTGATCAAGTTCTCTTCAATGGCGGATCTACAGATTCCGTTGTTAGAAATTACGCAAATGCCCCTGCCCGTTTCTTATCTGATTTTGCTGCTGCCATGGTCAAGATGGGAGACATCGCTCCTCTTACTGGCTCCAATGGTCAAATTAGGAAGAACTGCAGGAGGGTTAATTAA 972 43.72 MADLGSKTVLILTLGIFLLFLGNVSAQLSTGFYSSSCPNLLSTVKSSVRSAVSSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKSANPNRNSARGFDVIDNIKTAVENACPGVVSCADILAIAARDSVVFLGGPSWNVKLGRRDSTTASQSQANNDIPGPNSSLSQLSSRFSALGLSNTDLVALSGGHTIGQARCTTFRSRIYSNSSNIESLFARTRQSNCPNTSGSGDNNLAPLDLQTPNSFDNNYFKNLVQNKGLLQSDQVLFNGGSTDSVVRNYANAPARFLSDFAAAMVKMGDIAPLTGSNGQIRKNCRRVN 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19575862 19577626 - MELO3C019994.2.1 Cme03g01035 323046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01035 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cme03g01035 323 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cme03g01035 323 PANTHER PEROXIDASE 5 323 - -
Cme03g01035 323 PANTHER PEROXIDASE 72-RELATED 5 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 Gene3D - 32 323 - -
Cme03g01035 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 Gene3D Peroxidase, domain 2 165 302 - -
Cme03g01035 323 CDD secretory_peroxidase 27 322 IPR033905 GO:0004601|GO:0042744
Cme03g01035 323 ProSiteProfiles Plant heme peroxidase family profile. 27 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 MobiDBLite consensus disorder prediction 150 169 - -
Cme03g01035 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01035 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01035 Cme10g01373 CCT
Cme03g01035 Cme10g01373 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01035 Cme-Chr3:19575862 Cme11g01435 Cme-Chr11:21285753 4.07E-141 dispersed
Cme07g01686 Cme-Chr7:22396550 Cme03g01035 Cme-Chr3:19575862 4.21E-113 dispersed
Cme08g00553 Cme-Chr8:3469424 Cme03g01035 Cme-Chr3:19575862 2.91E-115 dispersed
Cme10g00322 Cme-Chr10:2115991 Cme03g01035 Cme-Chr3:19575862 5.89E-101 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01035 K00430 - csv:101218447 582.793