Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01099 ATGGAGAAGTGCCCTGTTTATCCTCTTCGTTCCCTGTTGATGCTCCTATTCATTTTGAGTCTTTTTGTTCCAAGTATGCCTCTTCCGACCGAGACTCAAGCGTTGCTTCGTTTCAAAGAGAATCTCAAAGACCCGACAGGTTTTCTTAATTCTTGGATTGATTCTGAATCCCCTTGTGGATTCTCTGGGATTACTTGCGACCGGGCTTCTGGAAAAGTTGTAGAAATTTCCTTGGAAAACAAGTCACTTTCTGGTGAGATTTCTCCATCCATTTCTGTTCTGCAATGGCTCACAACACTTTCATTGGCCTCAAACCATATTTCTGGGGAGCTTCCCAACCAACTAATCAACTGTAGCAATCTTAGAGTATTGAATCTCACTGATAATGAAATGGTTAAGAGGATTCCTGATCTTTCTCAGCTAAAAAAATTGGAGGTTCTAGATCTATCAATCAACTTCTTTTCAGGCCAATTCCCAATTTGGGTTGGAAATTTAACTGGATTGGTTTCTCTAGGACTTGGTCAAAATGAGTTCGAGGTTGGTGAGATTCCAGAATCTATTGGAAATTTGAAGAATTTAACTTGGCTATATCTGGCAAATGCACAATTGAGAGGGGAAATACCAGAGTCTCTCTTTGAATTGAAGGCATTAAAGACATTGGATCTTTCAAGGAACGAGCTTTCTGGTAAAATCTCCAAGTCAATATCCAAGTTGCAAAATCTGAATAAGCTTGAGCTGTTCATTAACAAGTTGACTGGAGAAATTCCACCAGAGATTTCAAACCTTACCCTTCTACAAGAAATTGATATTTCTGCTAATAGTTTGTATGGCCAGTTGCCAGAAGAGGTTGGGAACTTAAGGAATTTGGTGGTTTTTCAGTTGTATGAAAACAACTTCTCTGGAAAACTTCCTGAAGGATTTGGAAATATGCAAAACCTTATTGCATTTTCAATCTATAGGAACAATTTTTCTGGAGAATTTCCAGTGAACTTCGGCAGATTTTCTCCGCTCAACAGTATCGACATATCTGAGAACCAATTTTCAGGGATCTTTCCTCAGTTCTTGTGTGAGAAAAGGAAGTTGGAGTTCTTACTTGCTCTGGAAAATAGATTTTCTGGTGAGCTGCCATTTGCTTTAGCTGAGTGCAAATCACTGCAAAGATTCAGAATTAACAATAATCAAATGTCTGGCAGCATTCCAGATGGGGTATGGGCTCTTCCTAATGCAAAAATGATTGACTTTAGTGATAATGAATTCATTGGAATTATATCCCCAAACATTGGTCTATCTACTAGCTTGAGCCAGTTGGTTTTGCCAAACAATAAGTTTTCTGGTAACCTTCCATCAGAGCTTGGCAAGTTGACAAACTTAGAGAGGCTCTATTTGAGTAATAACAAGTTCGATGGAGAAATACCTTCTGAAATTGGTTTCCTCAGGCAACTTTCATCGTTACACCTGGAAGTAAATTCATTGAATGGATCAATCCCATTAGAGATCGGTAACTGTGAAAGACTTGTGGACGTAAATTTTGCTCAAAACTCTCTGAGTGGTAGCATTCCATCTTCATTTTCGTTAATCAGCTCTTTGAACTCCCTGAACCTGTCAAGCAACAAACTTTCAGGTATAATCCCAGAATCCTTGGAGAAGATGAAACTAAGTTCGATTGATTTGTCAGGAAATCAGCTGTTCGGAAGAGTTCCATCCAGTCTTCTGGCAATGAGTGGAGACAAAGCATTTTTGGACAACAAAGAACTCTGTGTTGATGAAAACTACAGAGAAAGGATAAATACCACCCTGGTAACTTGTACTGGAAAGAATAGTCAGAAAGGGGTGCTTAATGATGAACTTCTATTTTTCAGTATCATAGTTTCCATCTTGGTTTGTGTATTAGCAGGGCTAGCGTTTGTAAGTTATAATTGCTCGAAGATCAGTCAGACTGACCCAGAGGCCAGTCGGGAAGGGGACCGACAAGGAGCTCCAAAATGGAAAATTGCATCATTCCATCAAGTGGAAATCGATGCAGATGAAATATGCAGCTTTGAAGAAGAAAATTTGATAGGGAGTGGAGGAACAGGAAAAGTTTATCGGTTGGATCTCAAGAAAAATGGCAATACAGTGGCTGTTAAACAACTCCGGAAAGGAGATGCAATGAAGGTTTTGGCTGCAGAAATGGAGATTCTGGGGAAGATAAGGCATAGAAACATCTTGAAGCTCTATGCCTGCTTAATGAGAGAAGGCTCAAGTTATCTAGTTTTTGAATATATGACTAATGGCAACCTGTATGAAGCACTTCAGAGACAGATCAAAGGTGGACAGCCTGAGTTGAACTGGTATCAGAGGTACAAGATTGCACTGGGAGCAGCAAGGGGGGTTGCTTACTTGCACCATGATTGCTCACCACCTATAATTCATAGAGATATAAAATCAACAAATATACTTCTTGATGGAGATTATGAACCAAAAATTGCTGATTTTGGGGTTGCAAAAGTTGCAGATCAGTTTCAAAGTGCTTCTGAGCACAGCTCTCTTGCTGGCACTCATGGTTATATTGCTCCTGAGCTAGCATATACTCCGAAAGTTTCAGAAAAAAGTGATGTGTACAGTTATGGTGTGGTGCTATTAGAATTGATTACTGGAAGGAGACCAATAGAAGATGAATACGGAGAAGGAAAAGATATAGTCTACTGGATTTCAACACACCTCGATGACCGTGATAATGCCCTCAAGCTTCTAGACATCAGAGTTGCATCTGAAGCCATCCAAAATGACATGATTAAGGTCCTGAAGATTGCTGTACTTTGCACAACAAAGCTTCCATCACTTCGCCCTTCGATGAGAGAGGTAGTGAAGATGCTATCGGACGCTGATCCCTACTCTTCTTCAATGTCCCTGAACAACAGTTCAAATAAAAACATTAAGGATTTTGTTTAG 2931 39.78 MEKCPVYPLRSLLMLLFILSLFVPSMPLPTETQALLRFKENLKDPTGFLNSWIDSESPCGFSGITCDRASGKVVEISLENKSLSGEISPSISVLQWLTTLSLASNHISGELPNQLINCSNLRVLNLTDNEMVKRIPDLSQLKKLEVLDLSINFFSGQFPIWVGNLTGLVSLGLGQNEFEVGEIPESIGNLKNLTWLYLANAQLRGEIPESLFELKALKTLDLSRNELSGKISKSISKLQNLNKLELFINKLTGEIPPEISNLTLLQEIDISANSLYGQLPEEVGNLRNLVVFQLYENNFSGKLPEGFGNMQNLIAFSIYRNNFSGEFPVNFGRFSPLNSIDISENQFSGIFPQFLCEKRKLEFLLALENRFSGELPFALAECKSLQRFRINNNQMSGSIPDGVWALPNAKMIDFSDNEFIGIISPNIGLSTSLSQLVLPNNKFSGNLPSELGKLTNLERLYLSNNKFDGEIPSEIGFLRQLSSLHLEVNSLNGSIPLEIGNCERLVDVNFAQNSLSGSIPSSFSLISSLNSLNLSSNKLSGIIPESLEKMKLSSIDLSGNQLFGRVPSSLLAMSGDKAFLDNKELCVDENYRERINTTLVTCTGKNSQKGVLNDELLFFSIIVSILVCVLAGLAFVSYNCSKISQTDPEASREGDRQGAPKWKIASFHQVEIDADEICSFEEENLIGSGGTGKVYRLDLKKNGNTVAVKQLRKGDAMKVLAAEMEILGKIRHRNILKLYACLMREGSSYLVFEYMTNGNLYEALQRQIKGGQPELNWYQRYKIALGAARGVAYLHHDCSPPIIHRDIKSTNILLDGDYEPKIADFGVAKVADQFQSASEHSSLAGTHGYIAPELAYTPKVSEKSDVYSYGVVLLELITGRRPIEDEYGEGKDIVYWISTHLDDRDNALKLLDIRVASEAIQNDMIKVLKIAVLCTTKLPSLRPSMREVVKMLSDADPYSSSMSLNNSSNKNIKDFV 976
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20415691 20420408 + MELO3C019939.2.1 Cme03g01099 323110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01099 976 Gene3D Ribonuclease Inhibitor 315 594 IPR032675 -
Cme03g01099 976 Pfam Leucine rich repeat 508 562 IPR001611 GO:0005515
Cme03g01099 976 SMART LRR_typ_2 262 286 IPR003591 -
Cme03g01099 976 SMART LRR_typ_2 190 214 IPR003591 -
Cme03g01099 976 SMART LRR_typ_2 94 118 IPR003591 -
Cme03g01099 976 SMART LRR_typ_2 526 549 IPR003591 -
Cme03g01099 976 SMART LRR_typ_2 454 478 IPR003591 -
Cme03g01099 976 ProSiteProfiles Protein kinase domain profile. 680 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme03g01099 976 SUPERFAMILY Protein kinase-like (PK-like) 677 952 IPR011009 -
Cme03g01099 976 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Cme03g01099 976 Pfam Protein kinase domain 680 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme03g01099 976 Gene3D Phosphorylase Kinase; domain 1 679 758 - -
Cme03g01099 976 PRINTS Leucine-rich repeat signature 217 230 - -
Cme03g01099 976 PRINTS Leucine-rich repeat signature 526 539 - -
Cme03g01099 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Cme03g01099 976 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 12 964 - -
Cme03g01099 976 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
Cme03g01099 976 SMART serkin_6 680 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme03g01099 976 SUPERFAMILY L domain-like 183 444 - -
Cme03g01099 976 ProSiteProfiles Leucine-rich repeat profile. 528 549 IPR001611 GO:0005515
Cme03g01099 976 Gene3D Ribonuclease Inhibitor 181 236 IPR032675 -
Cme03g01099 976 Gene3D Ribonuclease Inhibitor 237 312 IPR032675 -
Cme03g01099 976 Gene3D Ribonuclease Inhibitor 28 180 IPR032675 -
Cme03g01099 976 SUPERFAMILY L domain-like 379 569 - -
Cme03g01099 976 Gene3D Transferase(Phosphotransferase) domain 1 759 974 - -
Cme03g01099 976 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Cme03g01099 976 SUPERFAMILY L domain-like 28 228 - -
Cme03g01099 976 Pfam Leucine Rich Repeat 217 238 IPR001611 GO:0005515
Cme03g01099 976 Pfam Leucine Rich Repeat 456 478 IPR001611 GO:0005515
Cme03g01099 976 Pfam Leucine Rich repeat 95 110 IPR001611 GO:0005515
Cme03g01099 976 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 964 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01099 Cme-Chr3:20415691 Cme04g00206 Cme-Chr4:1518847 0 dispersed
Cme03g01099 Cme-Chr3:20415691 Cme04g00205 Cme-Chr4:1506131 0 transposed
Cme03g01099 Cme-Chr3:20415691 Cme03g01772 Cme-Chr3:26199097 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64745 PF00069 Pkinase 5.30E-49 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01099 - - csv:101215749 1813.51