Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01109 ATGAACACCATGGGCATCTTTGAGGATATTAGCTTTTGCCGAAATCTTGAATATTTTTCGGCTCCTCCTGGAGAACAAGAGACAGCTCAGGAGCATGAAGCTGAAGCTGTTTTGGAGGAAGATTATAGTGATGAAGAGCTGGATGTTGATGAGCTTGAGAGAAGGATGTGGCGTGACCGAATGCTTTTGAGGCGACTCAAAGAACAGAGCAAAGAGAAGGAAGGTGCTGATAGTTCAAAGCAGCGTCAATCCCAGGAGCAGGCCCGAAGGAAGAAGATGTCTCGGGCTCAAGATGGGATCCTGAAGTATATGTTGAAAATGATGGAGGTCTGTAAAGCTCAAGGGTTCGTTTATGGGATTATTCCTGAGAAAGGAAAACCAGTCAGTGGAGCTTCTGATAATCTTCGTGCATGGTGGAAGGAAAAGGTTAGATTCGATAGAAATGGCCCTGCAGCAATTGCCAAATATCAGGCAGACCACGCAATTCCAGGAAACAACGATGACTGCAATACAGTGGCGTCCACTCCTCACACCTTACAAGAGCTTCAAGATACAACCCTTGGATCACTTTTGTCAGCTCTGATGCAGCACTGTGATCCACCTCAGAGGCGTTTTCCATTGGAGAAGGGAGTTTCCCCGCCGTGGTGGCCAACTGGAAATGAGGAGTGGTGGCCTGAGCTAGGACTACCTAAGGACCAGGGGCCACCTCCTTACAAGAAGCCCCATGATTTGAAGAAGGCTTGGAAAGTCAGCGTTCTCACTGCTGTGATTAAGCATATGTCACCTGATATTGCCAAGATTCGCAAGCTTGTTCGCCAGTCCAAGTGTTTGCAAGACAAAATGACTGCAAAGGAGAGTGCTACGTGGTTGGCTATTGTAAATCAGGAAGAAGCTTTGGCTAGGAAATTGTATCCTGATAAATGCCCACCTGTGTCGATTTGCGGGAGCGGATCTCTTTTGATCAGCGACACTAGTGATTATGATGTCGAAGGAGTTGAAGATGAACCAAATGTCGAAGCAGAGGAAAGCAAACCCCATGATCTCAACTTCTTTAATATGGGAGCTCCTGGATCTAGGGAGAGACTTATGATGCCACCTGTCTGTCCTCAGATTAAGGAAGAATTTATGGAAAACAATTCTGACTTCAATCAGAAGAGGAAGCAGATGACGGATGAATCAAATACGATAATGAACCCAAAGATGTATACTTGTGAGTATTCTCAATGCCCTTATAACAGTGCTCGTCTCGGGTTTCTTGACAGGAATTCAAGAAACAACCACCAGTTGAATTGCCCATTTAGGAGTGATTCTTCCCATATATTTAGCATGCCAAGCTTTCAATCTAACGAAGACAAATCGGCATCTCCCATTCCTCCATCCTTCAACCATCCTAAGGCACCTGCTCGGCTGATGAACCCGACTCCACCCTTCAGGGTATCAGGACTTGGACTTCCCGAAGATGGCCAGAAAATGATTTCTGACCTCTTGAGTTTCTATGATTCTAACCTCCAACAGGACAAACATTTGAATTCGGGTAATCTTGACATGCAAGACGATCACAACCAACAGCAACAACTGCCAAAATTCCAGCTCCAAGTCGACGATAATTTGTATTGTCAAGCCACAATGGTGGGAAATACTATGCCAATTCAGCAGCACCCTGATTTTTCTTCCAACAAACATCCATTTGACGAATACAAGGCAGCGTTCGATTCTCCATTTGGCATGTATCCCAACGATAACATCTCCGACTTCAGATTCGGTTCTCCATTTAACTTGGCATCAATCGATTATGCAGCAGCAGACACACAATTGCCCAAACAAGATACACCCTTGTGGTACCTTTGA 1848 45.24 MNTMGIFEDISFCRNLEYFSAPPGEQETAQEHEAEAVLEEDYSDEELDVDELERRMWRDRMLLRRLKEQSKEKEGADSSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGNNDDCNTVASTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPELGLPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKLYPDKCPPVSICGSGSLLISDTSDYDVEGVEDEPNVEAEESKPHDLNFFNMGAPGSRERLMMPPVCPQIKEEFMENNSDFNQKRKQMTDESNTIMNPKMYTCEYSQCPYNSARLGFLDRNSRNNHQLNCPFRSDSSHIFSMPSFQSNEDKSASPIPPSFNHPKAPARLMNPTPPFRVSGLGLPEDGQKMISDLLSFYDSNLQQDKHLNSGNLDMQDDHNQQQQLPKFQLQVDDNLYCQATMVGNTMPIQQHPDFSSNKHPFDEYKAAFDSPFGMYPNDNISDFRFGSPFNLASIDYAAADTQLPKQDTPLWYL 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 20497648 20501352 - MELO3C019931.2.1 Cme03g01109 323120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01109 615 Pfam Ethylene insensitive 3 50 297 IPR006957 GO:0005634
Cme03g01109 615 MobiDBLite consensus disorder prediction 21 45 - -
Cme03g01109 615 Gene3D - 174 307 IPR023278 GO:0003700|GO:0005634
Cme03g01109 615 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 4 614 IPR006957 GO:0005634
Cme03g01109 615 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 4 614 - -
Cme03g01109 615 Coils Coil 35 69 - -
Cme03g01109 615 Gene3D - 82 162 IPR023278 GO:0003700|GO:0005634
Cme03g01109 615 Coils Coil 372 392 - -
Cme03g01109 615 MobiDBLite consensus disorder prediction 68 93 - -
Cme03g01109 615 MobiDBLite consensus disorder prediction 442 456 - -
Cme03g01109 615 MobiDBLite consensus disorder prediction 442 472 - -
Cme03g01109 615 SUPERFAMILY DNA-binding domain of EIN3-like 176 300 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00432 Cme-Chr2:3580854 Cme03g01109 Cme-Chr3:20497648 0 dispersed
Cme02g00518 Cme-Chr2:5334893 Cme03g01109 Cme-Chr3:20497648 6.73E-134 dispersed
Cme03g01109 Cme-Chr3:20497648 Cme07g01755 Cme-Chr7:23062323 1.76E-88 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41017 PF04873 EIN3 3.10E-132 No_clan Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01109 K14514 - csv:101214396 1205.66