Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01169 ATGGCGTCTTCTTCTTCTTCTTCTTCTTTCTCTGATCATCAACTTTTCTTCTCGTTTTTAGCCTTCACCCTCTCTGCATTCATCTTCTTCCTCACTCATAAACGCACCTCTAAACCACGTCTCAACCTCCCCCCAGGACCCCGCGGCTGGCCCATCGTCGGAAACCTCTTCCAGGTCGCTCGCACCGGCAAGCATTTCTTCGAATATATTGAAGACATCCGCCAGATTTACGGCCCAATCTTCACTCTTCAGATGGGCGCTCGCACCATGATCATCTTGTCCGGCCCCGACCTCATCCACGAAGCCTTAATCAAACGTGGCCCTGCTTTCGCCAGCCGTCCCGCTGAAAATCCAACTCGAATCGTCTTCAGCAACAACAAATTCTCCGTTAACGCCGCCGTCTACGGCGGTGTCTGGCGCTCACTCCGCCGTAATATGGTTGAAAACATGCTCTCTTCCATTCGCTTGAAGGAGTTTCGCGATGTTAGAAAGAAGGCCATGGATAAGCTTGTTCAACGCATTCGAACCGACGCTGAGGCGAACGGCGGCGCCGTTTGGGTGTTGAAAAACTCTCGATTCGCTGTGTTCTGTATTCTTTTAGCGATGTGTTTCGGATTAGAAATGGATGAGGAATCGGTTGAGAAAATGGATCAAGTTCTTAAAACTGTTCTGATCACCGTCGATCCGAGAATCGACGATTTTCTCCCGATTTTGAGGCCGTTCTTCGCTAAACAGAGGAAACGAGCCATGGAAGTAAGAAGAGAGCAAATCGAATTCGTTGTTCAGTTCATTAATCGAAGAAAAAAAGCACTTCAAAATCCAGGTTCAGACATTAATGCAACTTCATTTTCTTACCTCGATACACTCTTTGATCTCAAAGTCGACGGCCGGAAATCTACTCCAACCGACGCCGAATTAGTCACTCTCTGTTCCGAATTCCTCAACGGTGGCGTGGACACGACGGCAACCGCCATCGAATGGGGAATCGCAGAGCTAATCTCAAACCCTAACATTCAGAAAAAGCTTCACGAAGAAATAAAGCAATTAGTAGGCGATAGAAAAGTAGATGAATCCGATGTTGAGAAATTGCCGTATCTTCAAGCGGTGGTGAAGGAATTACTGAGAAAGCATCCTCCGACGTACTTCTCGCTGACACACTCAGTGATCGAGCCGACAAAACTGGGGGGATATGATATTCCGATGGAGGCGAGTGTGGAGGTTTATTTAGCTGGAATTAGTAACGATCCGAAACTGTGGAAGAATCCGGAGAAATTTGAGCCGGAGAGATTCATATCGGGGGAGGAAGAGGTGGATATGACAGGGATAAAAGGAATGAAAATGATTCCGTTCGGGGTTGGAAGGAGAATTTGCCCGGGTTTGGGAATGGCGACGATTCACGTTCATCTGATGCTGGCGAGGTTGGTTCAGGAATTTGAATGGAGTTCGTATCCGGCGAATAGCGAATTGGATTTTACGAAGAAGTATGAATTTACTGTTGTGATGAAGAATTCTCTTAAAGCCATTGCCACAACCAGAGCTGCTTGA 1545 47.25 MASSSSSSSFSDHQLFFSFLAFTLSAFIFFLTHKRTSKPRLNLPPGPRGWPIVGNLFQVARTGKHFFEYIEDIRQIYGPIFTLQMGARTMIILSGPDLIHEALIKRGPAFASRPAENPTRIVFSNNKFSVNAAVYGGVWRSLRRNMVENMLSSIRLKEFRDVRKKAMDKLVQRIRTDAEANGGAVWVLKNSRFAVFCILLAMCFGLEMDEESVEKMDQVLKTVLITVDPRIDDFLPILRPFFAKQRKRAMEVRREQIEFVVQFINRRKKALQNPGSDINATSFSYLDTLFDLKVDGRKSTPTDAELVTLCSEFLNGGVDTTATAIEWGIAELISNPNIQKKLHEEIKQLVGDRKVDESDVEKLPYLQAVVKELLRKHPPTYFSLTHSVIEPTKLGGYDIPMEASVEVYLAGISNDPKLWKNPEKFEPERFISGEEEVDMTGIKGMKMIPFGVGRRICPGLGMATIHVHLMLARLVQEFEWSSYPANSELDFTKKYEFTVVMKNSLKAIATTRAA 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21172218 21173934 - MELO3C019884.2.1 Cme03g01169 323180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01169 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Cme03g01169 514 Pfam Cytochrome P450 44 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PANTHER CYTOCHROME P450 77A4 7 511 - -
Cme03g01169 514 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 511 - -
Cme03g01169 514 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 SUPERFAMILY Cytochrome P450 44 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01169 514 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01169 Cme-Chr3:21172218 Cme10g00136 Cme-Chr10:987254 0 dispersed
Cme07g01231 Cme-Chr7:16916637 Cme03g01169 Cme-Chr3:21172218 1.55E-60 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01169 K21995 - csv:101206763 952.584