Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01238 ATGGAGGCTACCGGGAGCGGCAGAGCCAGGGACCGCGGCGGAAGTTCATCAATGGAGATAGAGCGTCGTTCGCTGAGAGCAATTACGACCTCCTTCTTCGTCGAAGTTCTAACCGGACCTTGGTTCATGGTATTCGCTTCATTCCTAGTCATGTCCACCGCTGGAACGCCGTACATGTTCGGCCTTTACTCCGGCGCCATAAAATCCGTCCTCGGCTACGACCAGAGCACTCTCAATCTAATTAGCTTCTTCAAAGACCTAGGCACAAACGTGGGAATAATTGCCGGACTAATCGCGGAAATCATGCCACCGTGGGTTGTTCTGGCGATCGGAGCAGGGATGAATTTCGTGGGATACTTCATGATTTGGCTATCGGTGACGGAAAAAGTGGCGGCGCCGCCGGTGTGGCTGATGTGTCTTTACATTTGCATAGGGGCGAATTCGACGTCGTTTGCGAATACAGGGGCGTTGGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCGGTTTTGGGGATTTTGAAAGGATATGTAGGATTAAGCGGTGCAATTATGACGCAGTTTTATCATGCGATTTATGGAGATGATTCGAAATCGTTGATTCTTCTTCTTGCTTGGCTTCCGGCGGTGATTTTGGTGGTGTTCTTGAGGACGATTCGGATTATGAAGGTTCAACATCGGCCTAATGAACTCACAGTCTTTTACAGATTCTTGTACGTTTCTCTTGGTCTAGCCGGATTTCTCATGGTGATGATCGTTCTTCAACAAAAATTCAAATTCTCCCGCATCGAGTACAGTTCCAGCGCCGCCGTCGTCGTCTTTCTCCTCTTTTTGCCCATCTTCATCGTCATCGCCGAAGACTACAAATTCTGGCGCGTAAAACTATCTCAACTCCTAAATCCTTCTCCACTCACAATCATCACCCAAAAACCAACACCGCCGCCGCCGCAAAACCTCGAAACCTCCGGCATATCCCCCGCCGGGAAGCCAACGTCATCAACGCCGTCCTGCTGGACAACCGCCCTGAAGCCCCCTCCAAGAGGCGAAGATTACACGATTCTACAAGCGCTCTTCAGCGCCGACATGTTCCTCCTTTTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGCCAAATCGGCGCTTCTCTACAGTATCCTAAACGGAGCATTAGCACGTTTGTATCATTAGTAAGTATTTGGAATTACCTAGGGCGCGTAGTTTCGGGTTTCACCTCCGAAATTTTCCTCACCAAATACAAATTCCCTCGAACCCTAATTCTAACCTTAATTCTCCTCCTCTCCTGCGTCGGCCATATCCTAATCGCCTTCAATCCTCCTGGCGGCCTCTACTTCGCTTCAATCGTAATCGGATTCTGCTACGGCGCTCAATGGCCGATTCTATTCGCCATAATTTCAGAGATCTTCGGCCTCAAATACTATTCCACGCTTTACAATTTCGGATCCGTTGCGAGCCCAATCGGGTTGTATTTTGTCAATGTTCGAGTCGCTGGACATTTGTACGATGAGGAGGCGAAGCGGCAGTTGGCGGCGTCCGGGATGAAAAGGATACCCGGAAAAGAATTGAACTGCGTTGGTGTGAATTGCTTTAAAATGTCGTTCATTATAATCACCGGAGTTACGTTGCTTGGTGCTCTGTTCTCGTTTGTTTTGGTTCTTAGAACTAGAGCGTTTTACAAGACTGATATTTATAGGAAGTTTAGGGAGGAGGTTGAAGAAGATGAAGCTGGTGGAAATGACGTCGTTTCGAGTAATAAGTAA 1803 49.14 MEATGSGRARDRGGSSSMEIERRSLRAITTSFFVEVLTGPWFMVFASFLVMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGIIAGLIAEIMPPWVVLAIGAGMNFVGYFMIWLSVTEKVAAPPVWLMCLYICIGANSTSFANTGALVTCVKNYPARRGAVLGILKGYVGLSGAIMTQFYHAIYGDDSKSLILLLAWLPAVILVVFLRTIRIMKVQHRPNELTVFYRFLYVSLGLAGFLMVMIVLQQKFKFSRIEYSSSAAVVVFLLFLPIFIVIAEDYKFWRVKLSQLLNPSPLTIITQKPTPPPPQNLETSGISPAGKPTSSTPSCWTTALKPPPRGEDYTILQALFSADMFLLFLSTACGVGGTLTAIDNLGQIGASLQYPKRSISTFVSLVSIWNYLGRVVSGFTSEIFLTKYKFPRTLILTLILLLSCVGHILIAFNPPGGLYFASIVIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSVASPIGLYFVNVRVAGHLYDEEAKRQLAASGMKRIPGKELNCVGVNCFKMSFIIITGVTLLGALFSFVLVLRTRAFYKTDIYRKFREEVEEDEAGGNDVVSSNK 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 21970541 21974482 - MELO3C019835.2.1 Cme03g01238 323249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01238 600 Pfam Major Facilitator Superfamily 372 570 IPR011701 GO:0022857|GO:0055085
Cme03g01238 600 PANTHER MFS TRANSPORTER 28 590 - -
Cme03g01238 600 MobiDBLite consensus disorder prediction 311 338 - -
Cme03g01238 600 Gene3D MFS general substrate transporter like domains 355 574 IPR036259 -
Cme03g01238 600 SUPERFAMILY MFS general substrate transporter 24 224 IPR036259 -
Cme03g01238 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 590 - -
Cme03g01238 600 CDD MFS_Mch1p_like 39 559 - -
Cme03g01238 600 MobiDBLite consensus disorder prediction 322 338 - -
Cme03g01238 600 Pfam Nodulin-like 40 285 IPR010658 -
Cme03g01238 600 SUPERFAMILY MFS general substrate transporter 233 572 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01238 Cme-Chr3:21970541 Cme10g00105 Cme-Chr10:725073 0 dispersed
Cme10g00102 Cme-Chr10:714269 Cme03g01238 Cme-Chr3:21970541 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01238 - - csv:101208506 1124.38