Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01265 ATGGAACCCCGTCCGGAAAATGGCAACCATGGATGGCCGAAGGCCGAGCCCTCTTTGTGTGGCGGCGTGGCTGCGTACTGGAGCGGTGCGGCAAAAGGGCTCGAGGGGAGTCATTTGGAGGAGTTTAAGCGTATGGTGATGGAGTTTCGTCGTCCTATTGTGCGACTTGGAGGCGAGAGTCTCACGATAGCACAAGTTGCTGCCATTGCTGCTCGTAGCTCTGACGTCGTGGTGGAGCTTTCCGAGGAGTCTCGTTCTGCCGTGGAAGCAAGTAGTAGGTGGGTTGTTGAAAGTATGACTAATGGAACCGATAGTTACGGAGTTACGACTGGTTTTGGTTCTACATCTCATCGCAGGACTGATCAAGGAGAAGCCCTTCAAAAAGAACTCATTAGGTTCTTAAATGCTGGAATTTTTGGAAAAGGTTCGAATTCTTGTCATACGTTGTCTCTGCAAGCCACAAGAGCTGCCATGGTAGTAAGAATCAACACACTTTTGCAAGGTTATTCTGGCATTAGGTTTGAAATTTTGGAAGCAATAGCGAAATTACTCAATCACAACATAACTCCATGTCTCCCTCTTAGAGGCACCATCACAGCTTCTGGCGATTTAGTTCCCCTTTCATATATTGCTGGAGTTTTGACTGGTAGACCTAATTCTAAGGCCATTGGACCAAATGGTGAATCTCTTAACTCAACCGAGGCATTTCATCTTGCTGGGATTACCGGTGGTTTCTTAAATTTGCAGCCTAAAGAAGGTCTTGCTCTTGTCAATGGCACTGCGGTTGGGTCAGGCTTGGCTTCCATGGTTCTATATGAAGCTAACTTTCTTGCTATCCTTTCGGAGATATTGTCAGCAATTTTTGCTGAAGTTATGCATGGAAAACCCGAGTTTACAGATCATTTGACCCATAAATTAAAGCATCATCCTGGTCAGATTGAAGCAGCTGCTATTATGGAGCATATATTATATGGAAGTTCTTACATCAAAACTACTAAAAAGTTGCATGAAACTGACTCGCTTCAAAAGCCTAAACAAGATCGATATGCTCTTAGAACTTCTCCCCAATGGCTAGGTCCTCAAATTGAAGTCATTAGATACTCCACCAAAATGATTGAACGTGAGATTAACTCAGTGAATGATAACCCGTTGATTGATGTATCAAGAAACAAGGCTTTGCATGGAGGAAATTTCCAAGGCACTCCCATCGGTGTCTCTATGGATAATACTCGTTTAGCGATTGCTTCTATTGGCAAACTCATGTTTGCACAGTTCTCAGAACTTGTGAATGACTTCTACAATAATGGGTTGCCTTCAAACCTTACTGCTAGTAGAAACCCAAGTTTGGATTATGGATTCAAAGGTGCTGAGATTGCAATGGCTTCATATTGCTCTGAACTTCAATATTTGGCAAATCCGGTAACCAACCATGTTCAGAGTGCCGAACAACATAACCAAGATGTGAATTCATTAGGGTTGATATCATCGAGAAAAACAGCTGAAGCTATTGAGATTTTAAAGCTTATGTCCACAACTTACTTAGTAGCATTGTGCCAAGCTATTGATTTAAGACACATGGAGGAGAATTTGAAGAAAACGGTAAAGAACACTGTTTGCCAGGTCGCAAAAAAGATCCTTGTGTTGCATTTTAATGGCAATCTCCATCCAATTAGGTATAGTGAGAAGGATTTGCTTCAAGTTGTGGATAGAGAACACATTTTTGCATATATTGATGACCCTTGCAGTGCTTCGTATCCATTGATGCAAAGACTAAGACAAGTATTGGTAGATCATGCTTTAAAAAACTATGAGAAAGAAAGCAACCAAAGTGCTTCAATCTTTCAAAAGATCACAGCTTTTGAAGACGAATTAAAAGCACTTTTGCCTAAAGAAGTGGAAAATGCAAGAAAGGAAGTGGAAAAAGGAAGGGCCGCAATTGAAAACCAAATTAAAGAATGCAAATCTTATCCATTGTACAAGTTTGTTAGAGAAACATCGGGAACTCGATTGTTGACGGGTGAGAGGGATGTATCGCCAGGAGAAGAGTTCGATAAGATTTTTTCAGCCATTTCTGCTGGAAAATTGATAGATCCAATGCTTGAGTGTTTGAAGGATTGGAATGGAACTCCACTTCCTCTCAGTTAA 2145 41.68 MEPRPENGNHGWPKAEPSLCGGVAAYWSGAAKGLEGSHLEEFKRMVMEFRRPIVRLGGESLTIAQVAAIAARSSDVVVELSEESRSAVEASSRWVVESMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRFLNAGIFGKGSNSCHTLSLQATRAAMVVRINTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGDLVPLSYIAGVLTGRPNSKAIGPNGESLNSTEAFHLAGITGGFLNLQPKEGLALVNGTAVGSGLASMVLYEANFLAILSEILSAIFAEVMHGKPEFTDHLTHKLKHHPGQIEAAAIMEHILYGSSYIKTTKKLHETDSLQKPKQDRYALRTSPQWLGPQIEVIRYSTKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIEILKLMSTTYLVALCQAIDLRHMEENLKKTVKNTVCQVAKKILVLHFNGNLHPIRYSEKDLLQVVDREHIFAYIDDPCSASYPLMQRLRQVLVDHALKNYEKESNQSASIFQKITAFEDELKALLPKEVENARKEVEKGRAAIENQIKECKSYPLYKFVRETSGTRLLTGERDVSPGEEFDKIFSAISAGKLIDPMLECLKDWNGTPLPLS 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 22254626 22258090 - MELO3C019809.2.1 Cme03g01265 323276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01265 714 Gene3D Fumarase/aspartase (Central domain) 261 708 - -
Cme03g01265 714 Coils Coil 632 652 - -
Cme03g01265 714 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 26 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
Cme03g01265 714 Gene3D - 527 648 IPR023144 -
Cme03g01265 714 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 196 212 IPR022313 GO:0016841
Cme03g01265 714 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 26 713 - -
Cme03g01265 714 PANTHER HISTIDINE AMMONIA-LYASE 26 713 IPR001106 -
Cme03g01265 714 SUPERFAMILY L-aspartase-like 26 713 IPR008948 GO:0003824
Cme03g01265 714 Pfam Aromatic amino acid lyase 61 533 IPR001106 -
Cme03g01265 714 Gene3D - 22 260 IPR024083 -
Cme03g01265 714 CDD PAL-HAL 59 524 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01265 Cme-Chr3:22254626 Cme07g01986 Cme-Chr7:24978998 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01265 K10775 - csv:101206890 1312.36