Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01333 ATGGGTGGCGGTGGTGGTGGCGGTGCTCCGAGTAGGGAGTTAGATCAAACTCCGACATGGGCCGTTGCCGCTGTTTGTGCAGTCATCATTCTTATTTCCATCATATTGGAAAAGGTTCTTCACATGGTTGGAGAGATATTTCAGAAAAGGAAAAAGAAAGCCTTGTATGAAGCCCTTGAGAAAGTTAAAGGAGAGCTTATGGTTTTAGGATTCATTTCTTTGCTCTTAACATTTGGGCAAAATTATATTGCTAAAGTTTGCATACCCTCAAAGTATGAAAATACTATGTTGCCTTGCCCTTATAGAGGGAGTACTACTGCACCTAAAAGCTCCCATGGTGGTGAGCCCGAAGATCATGATGAAGAGACTACAGATCACCATCGTAGGCTTCTTTGGTACGAGCATCGACATCTAGCTGGTGGTGGTCCTGTAGAAGGTTGCAAACCAGGGTATACACAACTTATATCTCTAAATGGTTTGCATCAAATACATATTTTCATCTTCTTTCTAGCCGTTCTCCATGTTGTATTTAGCGCCATAACGATGACTCTCGGAAGATTGAAAATTCGTGGATGGAAGGTATGGGAAAGACAGACCGAACAAGAACATGATGCCATGAACGGTATAGTATCCTTCTGGAGGCAATTCTTTAGGTCCGTTAGTAGGCCAGATTACTTGTCCCTTAGACATGGTTTTGTCACCGTTCATTTAGCCCCTGGGAGTAAATTTGACTTTCAGAAATACATCAAAAGGTCATTAGAAGATGACTTTAAGGTGGTCGTGGGAATCACTCCTCTGCTATGGGCATCAATGGTGCTTTTTCTGCTTCTCAATGTTAGTGGGTGGCAAGTTATGTTTTGGGTGTCCATATTTCCTCTAGTGGTGATCTTAGCCGTTGGAACAAAGTTGCAGGGAATTATAACGCAAATGGCTCTTGAAATCAAAGAAAGACATGCAGTGGTTCAAGGGATTCCCCTTGTTCAAGTCTCTGATAGACACTTTTGGTTTAGTTGGCCCGTTTTGGTTCTTTATCTCATCCACTATGTCCTTTTCCAGAATGCATTTGAGATTACATATTTCTTTTGGATATGGTATGAATTTGGGTTGAGATCGTGCTTTCATGACAACTTTGATCTTATTATCGTGAGAGTTGCCCTAGGGGTTGGAGTCCAGATTTTGTGCAGTTACATTACACTCCCATTATATGCTCTTGTAACTCAGATGGGATCAACAATGAAGAAATCCATATTTGATGAACAAACTTCGAAAGCATTGAAGCAATGGCATAGAAGTGCTTTGAAGAAAAAGAACGAAGGAGGAAAGCCTGAATCAACGCCGATGCGAACTTTAGGCGGTGTCGGAGGAAGCCCCCCCGAGTCACCGATACAACCTTCGCATGATCAGTTCCAACATCAATCGGTCAATCAATTATCATCACCAACCGACGTCGAAGCCTCCGCCCAGCTTCCTTCAGCCGACGTAATGGCTACCGTTGATCTCCACCACCACCAACAAAACTATGCTAATCGTGACTTGTTGAGTTGA 1545 42.91 MGGGGGGGAPSRELDQTPTWAVAAVCAVIILISIILEKVLHMVGEIFQKRKKKALYEALEKVKGELMVLGFISLLLTFGQNYIAKVCIPSKYENTMLPCPYRGSTTAPKSSHGGEPEDHDEETTDHHRRLLWYEHRHLAGGGPVEGCKPGYTQLISLNGLHQIHIFIFFLAVLHVVFSAITMTLGRLKIRGWKVWERQTEQEHDAMNGIVSFWRQFFRSVSRPDYLSLRHGFVTVHLAPGSKFDFQKYIKRSLEDDFKVVVGITPLLWASMVLFLLLNVSGWQVMFWVSIFPLVVILAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPVLVLYLIHYVLFQNAFEITYFFWIWYEFGLRSCFHDNFDLIIVRVALGVGVQILCSYITLPLYALVTQMGSTMKKSIFDEQTSKALKQWHRSALKKKNEGGKPESTPMRTLGGVGGSPPESPIQPSHDQFQHQSVNQLSSPTDVEASAQLPSADVMATVDLHHHQQNYANRDLLS 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 22883415 22889076 - MELO3C026525.2.1 Cme03g01333 323344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01333 514 MobiDBLite consensus disorder prediction 103 122 - -
Cme03g01333 514 MobiDBLite consensus disorder prediction 461 486 - -
Cme03g01333 514 MobiDBLite consensus disorder prediction 432 490 - -
Cme03g01333 514 Pfam Mlo family 204 447 IPR004326 GO:0006952|GO:0016021
Cme03g01333 514 Pfam Mlo family 12 203 IPR004326 GO:0006952|GO:0016021
Cme03g01333 514 PANTHER MLO-LIKE PROTEIN 5-RELATED 4 207 - -
Cme03g01333 514 PANTHER MLO-LIKE PROTEIN 5-RELATED 209 458 - -
Cme03g01333 514 PANTHER MLO-LIKE PROTEIN 1 4 207 IPR004326 GO:0006952|GO:0016021
Cme03g01333 514 PANTHER MLO-LIKE PROTEIN 1 209 458 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01333 Cme-Chr3:22883415 Cme12g00306 Cme-Chr12:3967524 2.59E-154 dispersed
Cme04g00323 Cme-Chr4:2588411 Cme03g01333 Cme-Chr3:22883415 1.61E-24 dispersed
Cme11g02498 Cme-Chr11:31543434 Cme03g01333 Cme-Chr3:22883415 2.07E-28 dispersed
Cme03g01333 Cme-Chr3:22883415 Cme08g01000 Cme-Chr8:6523121 1.26E-178 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01333 K08472 - csv:101208890 909.442