Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01414 ATGGAGGAAGAGGAATCCGGCGAGGCTATCCGGCCAGAATTTCCAACGGGCCGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTCTAGTCTCATGCGCCACAGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATCCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCACTTCCTCTTCCGTCTCAGCCGTCGGATGCGTCGGCGAAGGACGAGAATCGCATTCGCGCTGTCGTTGACAAAGTGGCTCCTGCAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGCCAACTAAGACAACGTCGGCGGAGACCAACGAGTCATAG 423 51.3 MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTRRIDDFFRRPTKTTSAETNES 140
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23564378 23565287 + MELO3C011458.2.1 Cme03g01414 323425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01414 140 SUPERFAMILY Histone-fold 12 91 IPR009072 GO:0046982
Cme03g01414 140 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 76 IPR003958 -
Cme03g01414 140 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 2 130 - -
Cme03g01414 140 Gene3D Histone, subunit A 1 91 IPR009072 GO:0046982
Cme03g01414 140 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 2 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01414 Cme-Chr3:23564378 Cme10g00737 Cme-Chr10:4691158 8.17E-12 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41037 PF00808 CBFD_NFYB_HMF 2.30E-20 CL0012 Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01414 - - cmo:103488501 236.498