Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01448 ATGTCTTCCGCCGAGAAGGAAAGAGAGACCCAGGTTTACATGGCCAAACTCGCCGAGCAGGCCGAACGCTATGACGGTTTTGGTATTCCTTTTCGTGTTGAATTTGTAGTCGAAATGCTGATTGGTGTTGAAATGGTCGAGTGTATGAAGAATATTGCAAAACTTGACCTCGAACTAACTGTAGAGGAGAGGAACCTTCTTTCTGTGGGGTACAAAAATGTCATAGGTGCACGACGAGCCTCTTGGCGCATCATGTCTTCAATTGAGCAGAAAGAGGAGTCTAAGGGGAATGAGAACATTGTAAAATTGATAAAGAGTTACCGCCAAAAAGTGGAGGAGGAGCTTACAAAGATTTGCGGTGATATTCTCTCTATCATTGACAAGCATCTAATCCCTCATTCGTCCTCTGCAGAAGCCACTGTTTTCTACTACAAGATTTACTGCCATGGCATCCATGATTTCAGGAAAGGTGACTACTATCGTTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAGGCTGCTGATCAGTCGTTGAAGGGATATGAGGCATTTATTTTCTTTATAACATTCAAGTTTCACATCATTAAATATAAAAGAACAATAGCCTCCTTTGCAATTGCTGCATCAGGTACTGCTAATAACGAACTCCCATCAACCCACCCAATCCGTCTTGGCCTTGCCCTCAACTTTTCTGTCTTCTACTATGAGATTATGAACTCTCCTGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATCGCGGAGTTGGATACCTTGAGTGAGGAATCATACAAGGACAGCACTCTGATCATGCAGCTGTTGAGAGATAACCTCACCCTCTGGACCTCAGATTTGCCTGAAGATGGCGGTGACGAAAACTTCAAAGCTGAGGAATCCAAACCTGCTGAACCCGAGGCCCAGCAAGCGAAATGA 948 43.88 MSSAEKERETQVYMAKLAEQAERYDGFGIPFRVEFVVEMLIGVEMVECMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENIVKLIKSYRQKVEEELTKICGDILSIIDKHLIPHSSSAEATVFYYKIYCHGIHDFRKGDYYRYLAEFKTDQDRKEAADQSLKGYEAFIFFITFKFHIIKYKRTIASFAIAASGTANNELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDENFKAEESKPAEPEAQQAK 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23809227 23812902 - MELO3C011421.2.1 Cme03g01448 323459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01448 315 PANTHER BNAC03G57490D PROTEIN 209 310 - -
Cme03g01448 315 ProSitePatterns 14-3-3 proteins signature 2. 269 288 IPR023409 -
Cme03g01448 315 PRINTS 14-3-3 protein zeta signature 58 87 IPR000308 -
Cme03g01448 315 PRINTS 14-3-3 protein zeta signature 107 131 IPR000308 -
Cme03g01448 315 MobiDBLite consensus disorder prediction 289 315 - -
Cme03g01448 315 Gene3D - 1 300 IPR036815 -
Cme03g01448 315 MobiDBLite consensus disorder prediction 293 309 - -
Cme03g01448 315 Coils Coil 247 267 - -
Cme03g01448 315 SUPERFAMILY 14-3-3 protein 7 289 IPR036815 -
Cme03g01448 315 ProSitePatterns 14-3-3 proteins signature 1. 64 74 IPR023409 -
Cme03g01448 315 Pfam 14-3-3 protein 210 287 IPR023410 -
Cme03g01448 315 Pfam 14-3-3 protein 44 184 IPR023410 -
Cme03g01448 315 PANTHER 14-3-3 PROTEIN 209 310 IPR000308 -
Cme03g01448 315 SMART 1433_4 8 300 IPR023410 -
Cme03g01448 315 PANTHER 14-3-3 PROTEIN 4 185 IPR000308 -
Cme03g01448 315 PANTHER BNAC03G57490D PROTEIN 4 185 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01448 Cme-Chr3:23809227 Cme10g00363 Cme-Chr10:2337132 4.51E-164 dispersed
Cme03g01448 Cme-Chr3:23809227 Cme03g01863 Cme-Chr3:26886991 2.22E-124 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01448 - K06630 csv:101221858 477.248