Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01456 ATGCCGAGCATTTCGGCCCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAGCGACGACTGTTGGATCATTATCGATGGCAAGGTATACGATTTGACTTCATATTTGGATGAGCATCCTGGTGGAGATGATATTATTGTGACTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGATGCCAGGGAGTTGATGGAGAAGTTCTATATTGGCTTGCTTGATACATCTTCCTCGGATAGCTTAAAACTTGAAACGAATCAAGTAGACAGTTATGCAACTCGGGTTCAGACCTTGACAAAGCAATACTGGAAGGCCCCCGTTGCAGTAATTGGTATTTCTATGGTACTTGGTTGGGTATACTTGCGCAAAAAGTGA 396 43.69 MPSISALYSIQEVSQHSSSDDCWIIIDGKVYDLTSYLDEHPGGDDIIVTATGRDATDDFEDAGHSKDARELMEKFYIGLLDTSSSDSLKLETNQVDSYATRVQTLTKQYWKAPVAVIGISMVLGWVYLRKK 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23847288 23849876 + MELO3C011415.2.1 Cme03g01456 323467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01456 131 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Cme03g01456 131 PANTHER CYTOCHROME B5 3 130 - -
Cme03g01456 131 PANTHER CYTOCHROME B5 ISOFORM A 3 130 - -
Cme03g01456 131 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 84 IPR036400 -
Cme03g01456 131 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Cme03g01456 131 Gene3D - 5 94 IPR036400 -
Cme03g01456 131 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cme03g01456 131 SMART Cyt_b5_2 8 81 IPR001199 -
Cme03g01456 131 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cme03g01456 131 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cme03g01456 131 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cme03g01456 131 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01456 Cme-Chr3:23847288 Cme06g00386 Cme-Chr6:2431054 4.16E-31 dispersed
Cme03g01456 Cme-Chr3:23847288 Cme05g00704 Cme-Chr5:8215431 1.09E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01456 K23490 - csv:101220127 251.906