Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01528 ATGTCTAGTCTCTTCTTCACCTCTCTTCTCCTCTTTTTTTCCTTAGTACTTCTTCCTTCTCTCAATGCCTTGAGCCACCATTACTATGACCACACATGCCCTAATCTCGAGTCCATCGTCGCTCGAGAAGTTCGCTTAGCCACTGCAAACGACAAGACCGTTCCTGCTGCGTTGCTACGAATGCACTTCCACGATTGTTTCATCAGAGGTTGCGATGGCTCTGTACTTCTCGACTCTAAGGGGAAGAACACAGCTGAAAAAGATGGCCCTCCTAATATATCTCTCCATGCTTTTTATGTCATTGATAATGCCAAGAAAGCAATTGAATCTACTTGTCCTGGCGTGGTTTCTTGTGCTGATATCTTAGCTCTTGCTGCTCGAGACGCTGTTGTTGTGTCAGGAGGTCCTCACTGGGAAGTCCCAAAAGGAAGAAAAGATGGAAGAATCTCAAAAGCTAGTGAAACTAGACAACTACCAGCTCCCACATTCAACTTCTCTCAACTCCAACAAAGCTTCTCCCAAAGAGGCCTTTCATTACATGATCTTGTCGCTCTTTCAGGAGGCCACACTCTAGGATTTGCCCATTGCTCGTCGTTTCAAAACCGAATCCACAACTTCAACTCGAGCCTCGATGTCGACCCATCACTGGATCCGAGCTTTGCGGCCAGTCTACGTAGGGTATGTCCGGCGAGAAACAAGGTGAAAAACGCAGGGTCAGCCATGGATTCGAGTACAACAGTATTTGACAATGCATATTACAAGCTTCTTCTCGACGGGAAGAGCATATTTTCATCAGATCAATCTTTGCTTTCAACACCAAAAACAAAAGCCTTGGTCTCAAAATTTGCCAATGAACAACATCTGTTTGAGAAGGCTTTTGTTAAGTCCATGGTGAAGATGAGTCAGATAGCCGGCGCCGGGCAAGAGGTCCGGCTGAACTGCAGGTTGGTCAGATGA 957 46.19 MSSLFFTSLLLFFSLVLLPSLNALSHHYYDHTCPNLESIVAREVRLATANDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNTAEKDGPPNISLHAFYVIDNAKKAIESTCPGVVSCADILALAARDAVVVSGGPHWEVPKGRKDGRISKASETRQLPAPTFNFSQLQQSFSQRGLSLHDLVALSGGHTLGFAHCSSFQNRIHNFNSSLDVDPSLDPSFAASLRRVCPARNKVKNAGSAMDSSTTVFDNAYYKLLLDGKSIFSSDQSLLSTPKTKALVSKFANEQHLFEKAFVKSMVKMSQIAGAGQEVRLNCRLVR 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 24448350 24449993 + MELO3C011348.2.1 Cme03g01528 323539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01528 318 Pfam Peroxidase 41 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PANTHER PEROXIDASE 25-RELATED 9 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Cme03g01528 318 PANTHER PEROXIDASE 64 9 317 - -
Cme03g01528 318 SUPERFAMILY Heme-dependent peroxidases 24 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme03g01528 318 Gene3D - 27 317 - -
Cme03g01528 318 CDD secretory_peroxidase 24 317 IPR033905 GO:0004601|GO:0042744
Cme03g01528 318 Gene3D Peroxidase, domain 2 159 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01528 Cme-Chr3:24448350 Cme08g00959 Cme-Chr8:6309820 1.70E-158 dispersed
Cme07g00146 Cme-Chr7:928884 Cme03g01528 Cme-Chr3:24448350 1.65E-82 dispersed
Cme03g01528 Cme-Chr3:24448350 Cme08g00553 Cme-Chr8:3469424 5.61E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01528 K00430 - csv:101214403 589.341