Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme03g01617 | ATGGGATCAGAAGAAAGTGAAAAGATAGTGGTAACTCAAGTAAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCCGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCTTGGACTCCTCCAGAATCATACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTGCATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGCGAGCTTCTTTTTAACGGTAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGTATACAGTTTTGAAGTGTGATTACAAATTGGAGTTCATAGTGAGGGACATTAATCAGATCAAAAGATATACGGATACATCATGTTATGTTATTCTCTTGCAGCTTACATCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCTAAATCAGTTCCATATGATTTGTTGGATGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATCTAAAAGAACAAAGAGTTCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACCGATCACTTCTTTTGCATCTTTTATAAAGAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAACACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATTCTTATAGACGTCCTGTGTTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACGCTTTGGAAAAGATCTAAAGAGCTGGTAGATATCGTTGAAATCAGGAGATTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACATGTTTATACCTATTATGTTGCCCCCATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACCAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTCTTTGCTGAATGCAAAAATATAAGTGTTGATGGTATTTTGGGTTGGATGGGGAAATTTACCAATAAAAATGTTGCCAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCACAATCTTCAGGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCTGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGGAGGACGGGATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAGATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTTCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCTTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCTAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGCCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTGGTAAGAGGGACTGTAGTCATAGCGAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTCGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCAAAATGGTGAACGACCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGCGATCTCTACTTCACTACTTGGGATGAAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGATGTAAAGACTCTTCAACGTAAAATTACTCGATTGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACAATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGTATGGAGCTTTGGATGAGAACTGTATTCAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGATCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCGTATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTATGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGAATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAAATTGTCACTGGACATATTTGGTCCATGCCAAAGTACGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAGCATTCTTATAGCACTCTTAAGAAAGATTTCAGGCAAGTTTTTGAGAATATTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCATTTTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCGACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCGCCTGAGGCCATCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGATGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGAAAAGGGAGGGAAATAGAGTTGGAGTAGCAATGGCGGCAAAAGCTATGCGAGGAAGAAGAAAAACCCCAGAACAGAGGCAAATGCCGCGCTTGCTTCATGGGACGCTTCATGCCGATATATATGGAATCGACAAGCTTCAAACTGGATTTCCTATTTTCTGCGGGAAGTCTCTAACTGAGGTGAATTTTGCATTGCAGGACAAAAGGTCGACCAAAAAGTTTCTTGCTGGAGTGAAGAGATGCATCCTTTGTCGTCCCGAGATTGTTGGATCTCGAATGTATGCAACAGTCGATCTTGATAAGGCCAGAGTTGGTCGGACGAGAATAGTGGATCAGCCATACAGTCCTCAATGGAACGATCATTTTCGTATATATTGTGCTCATACAGTGTCACATATTATATTCACAGTTAAAGATGGAGATTTCATTGGTGCAACATTAATTGGAAGAGCTTATGTGCCTGTTGAGGAAATCATCAAGGGATTTGTATTTGAGAAATGGGTTGACATATTAGATGAAGACGGTAAACCTTTATATGGTCGTTCTAGAATCCATGTAAAGTTGCAATTTTCAAGTGTTAATGAAGACAGGAACTGGTCCCGAGGAATCTTGGATCCGAATTTTGAATGTGTACCTTTCACATTCTTCAAACAAAGATGGGGTTGTAAAGTTTCTCTTTACCAGGATGCTCATGTTTTAAACAACTTCCTTCCTCGAGTTGGTTTGTCAGGAGGGAATTTTCATGAAGTACACAGGTGTTGGGAGGACATTTTTGATGCAATTAGCAACGCGAGACACTTGATTTACATAACTGGTTGGTCTGTGTATACAGAAATAACTTTGATCAGAGACAGAGAAAGAAGACAAACAGGAGATGATATTACTCTGGGGCAACTGCTAAAGAAGAAGGCAGAAGAAGGTGTGACCGTTTTGCTTCTTGTTTGGGATGACAGGACTTCCATTGAAGTGTTCAAAAGAGATGGTTTGATGGCAACTCACGATCAAGAAACTGCAGAATACTTCAGGAACTCGAAGGTACGTTGCGTTCTATGTCCACGGAGTCCTGATGTAGGCAGAAGTACGATTCAGGGGTTTGAGACTGATACCATGTTTACTCACCACCAAAAAACAGTTGTGCTTGATAGTGAAATAGTTGGTGGAGGAACAGAAAAAAGAAGGATCATAAGTTTCGTTGGTGGCATTGATCTGTGTGATGGGAGATACGATACATCGCAGCACCCTTTGTTTTCAACTCTAGATTCAATCCACTATAACGATTTTCACCAGCCTAACTTTTCAGGCTCTTCAATTAGGAAAGGTGGTCCTCGAGAACCATGGCATGACATCCATTGCCGCCTAGAAGGGCCTGTTGCTTGGGATATTTTGTACAATTTTGAGCAAAGATGGAAAAAGCAAGTTGGAAATAACTCGTTGATTCCAATGCAAAAGTTTGAAGAAATCATTACCCGCCCAGTAATGGTTTTACCAGCAGACGACCCTGACACGTGGAGTGTTCAAATATTTCGGTCTATTGATGGTGGTGCTGTACATGGTTTTCCAAATACACCCGAAGGTGCAGCCGAAGTCAACCTTGTAACTGGAAAGAATAATGTTATAGATAGGAGTATTCAAGATGCTTATATTAATGCTATTCGCCGAGCAAAAAAATTCATATACATTGAGAATCAATATTTCCTTGGAAGTTCTTATGGTTGGAAAGCAGCTGGTATAAGGGTAGAAGAAATCAATGCTTTGCATACTATTCCTAAGGAGATATCACTGAAGATTGTGAGCAAGATTGAAGCTGGAGAGAGATTTACAGCATATGTTGTGATTCCAATGTGGCCAGAAGGTATTCCCGAGAGTGCTTCAGTTCAAGCTATATTAGATTGGCAAAGGAGAACATTAGACATGATGTACACAGATATATCTCAAGCCCTTCGGAAGAAGGGCCTTGATGCAAATCCTAGAGATTACCTGACATTCTTCTGCCTTGGCAATCGAGAGAAGAAGAGAACTGGAGAATATATACCACCAGAGAAACCAGAGCCCAATTCGGATTATGCTCGGGCTCAAGAGCACCGACGTTTCATGATCTATGTTCACTCCAAAATGATGATAGTTGACGATGAGTACATAATTATTGGATCTGCCAACATCAACCAAAGATCAATGGATGGAGGAAGAGACTCTGAGATTGCAATGGGGGCTTTTCAACCTCGTCACTTGGCATCCAGTGAGCCAGCGAGAGGTCAAATCTACGGCTTCAGAGTGGCTCTATGGTACGAGCATCTTGGTCTGTTTGACAAAGTCTTCCATAACCCAGAGAGTGAAGACTGCATCCAATTCGTAAACAAGCTCGCTCAAGAGAACTGGCAATTTTACTCGGACGATACGTACGATGGCGATCTTCCTGGCCATTTGCTTTCCTATCCCATCCAAGTAGGACCCAACGGATCGGTTTCGGCACTGCCAAAATTTGAATTTTTCCCTGACACGAAGGCTCGTGTTCTTGGCCAACTATCCGAGTTGAGAGTTAGTGAACAGGGAACTTCTCCTGGCTTTTTACCCATCATTCCTTTCTTCAAGTTCTTGGAGATTGTTTACGCAGGGGAAACTATGTATTCTAGGTGTTGTCTCCTCAACCGCTTAGAAGGTTGCTCTAGCAAGAATCCATGTTGTTCTTTCTTACAGTTTTCTGGAGAATATATGCGCGCTCTTATTCTTTTGATGGTGGATAAAATCAAGCTTCTTTTCCATAAAAGAAGGCGTGAGGGATGCTGCTCTGCATCTGCACTAGGTAATGCAATGGATGGGCCGTCTAAAGGTCTGAGAGTTAAAGACAAAGAAGCAAAGAAACAATGCTTACCAGAAAATTTCCCTAGCTCTAGCACATGTGAAATGGACAACAGTACAGTTTGGTCCCAGAGAAGCATGGCATCAGCCCAATCACATGATTCTCAAAGCAATATTGGGAGCAGTACAGACTTTGTAAATTCTGGACTACTTCTTTGGAATGAGACCAGGAAGCAATGGGTTGGAAATAAAATGTCCAAGAGCCAAAAGCAAGTTCAGGAACCTAAAATAAGCTGGAATGCTACTTACGACAGCTTACTAACAACGAACAAGCCGTTCCCTGAGGCCATACCTCTTACT | 6723 | 41.74 | MGSEESEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHINQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNKYTVLKCDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILNEPDYGVQMTDHFFCIFYKEDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSHIHSYRRPVLDACKKLKLVQEWLLKNPTLWKRSKELVDIVEIRRLVITPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKNISVDGILGWMGKFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHNLQDVERNGYVFSDGIGTITPDLAQEVADKLKMDGSLPCAYQIRYAGYKGVVATWPSKEDGIRLALRPSMNKFESDHRILEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPQNGERPHTNEASGSDLDGDLYFTTWDENLIPPSKKSWPPMEYAPADVKTLQRKITRLDIMEFFAKNMINESLGTICNAHVVHADRSKYGALDENCIQLSELAATAVDFPKTGKIVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENIGPEFEQLTCDERNAFYEKKASAWYQVAYHPTWLKKSLELREPDAPEAIPMLSFPWIAADYLARIKIKCRRMKSFDPTKPINSLKREGNRVGVAMAAKAMRGRRKTPEQRQMPRLLHGTLHADIYGIDKLQTGFPIFCGKSLTEVNFALQDKRSTKKFLAGVKRCILCRPEIVGSRMYATVDLDKARVGRTRIVDQPYSPQWNDHFRIYCAHTVSHIIFTVKDGDFIGATLIGRAYVPVEEIIKGFVFEKWVDILDEDGKPLYGRSRIHVKLQFSSVNEDRNWSRGILDPNFECVPFTFFKQRWGCKVSLYQDAHVLNNFLPRVGLSGGNFHEVHRCWEDIFDAISNARHLIYITGWSVYTEITLIRDRERRQTGDDITLGQLLKKKAEEGVTVLLLVWDDRTSIEVFKRDGLMATHDQETAEYFRNSKVRCVLCPRSPDVGRSTIQGFETDTMFTHHQKTVVLDSEIVGGGTEKRRIISFVGGIDLCDGRYDTSQHPLFSTLDSIHYNDFHQPNFSGSSIRKGGPREPWHDIHCRLEGPVAWDILYNFEQRWKKQVGNNSLIPMQKFEEIITRPVMVLPADDPDTWSVQIFRSIDGGAVHGFPNTPEGAAEVNLVTGKNNVIDRSIQDAYINAIRRAKKFIYIENQYFLGSSYGWKAAGIRVEEINALHTIPKEISLKIVSKIEAGERFTAYVVIPMWPEGIPESASVQAILDWQRRTLDMMYTDISQALRKKGLDANPRDYLTFFCLGNREKKRTGEYIPPEKPEPNSDYARAQEHRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPRHLASSEPARGQIYGFRVALWYEHLGLFDKVFHNPESEDCIQFVNKLAQENWQFYSDDTYDGDLPGHLLSYPIQVGPNGSVSALPKFEFFPDTKARVLGQLSELRVSEQGTSPGFLPIIPFFKFLEIVYAGETMYSRCCLLNRLEGCSSKNPCCSFLQFSGEYMRALILLMVDKIKLLFHKRRREGCCSASALGNAMDGPSKGLRVKDKEAKKQCLPENFPSSSTCEMDNSTVWSQRSMASAQSHDSQSNIGSSTDFVNSGLLLWNETRKQWVGNKMSKSQKQVQEPKISWNATYDSLLTTNKPFPEAIPLT | 2241 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 25062581 | 25077368 | - | MELO3C011257.2.1 | Cme03g01617 | 323628 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme03g01617 | 2241 | Pfam | Phospholipase D C terminal | 1958 | 2029 | IPR024632 | - | |
| Cme03g01617 | 2241 | ProSiteProfiles | C2 domain profile. | 1205 | 1357 | IPR000008 | - | |
| Cme03g01617 | 2241 | Pfam | Protein of unknown function (DUF4050) | 2153 | 2216 | IPR025124 | - | |
| Cme03g01617 | 2241 | PANTHER | RNA-DEPENDENT RNA POLYMERASE | 7 | 1193 | IPR007855 | GO:0003968 | |
| Cme03g01617 | 2241 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 12 | 114 | IPR000504 | GO:0003723 | |
| Cme03g01617 | 2241 | SMART | C2_3c | 1224 | 1356 | IPR000008 | - | |
| Cme03g01617 | 2241 | Pfam | Phospholipase D Active site motif | 1887 | 1913 | IPR001736 | GO:0003824 | |
| Cme03g01617 | 2241 | Pfam | Phospholipase D Active site motif | 1558 | 1596 | IPR001736 | GO:0003824 | |
| Cme03g01617 | 2241 | Pfam | RNA dependent RNA polymerase | 417 | 999 | IPR007855 | GO:0003968 | |
| Cme03g01617 | 2241 | PANTHER | RNA-DEPENDENT RNA POLYMERASE 6 | 7 | 1193 | - | - | |
| Cme03g01617 | 2241 | Gene3D | C2 domain | 1273 | 1392 | IPR035892 | - | |
| Cme03g01617 | 2241 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 1280 | 1382 | IPR035892 | - | |
| Cme03g01617 | 2241 | CDD | C2_plant_PLD | 1217 | 1379 | - | - | |
| Cme03g01617 | 2241 | CDD | RRM_SF | 14 | 110 | - | - | |
| Cme03g01617 | 2241 | SUPERFAMILY | Phospholipase D/nuclease | 1384 | 1669 | - | - | |
| Cme03g01617 | 2241 | Pfam | C2 domain | 1280 | 1358 | IPR000008 | - | |
| Cme03g01617 | 2241 | SMART | pld_4 | 1558 | 1596 | IPR001736 | GO:0003824 | |
| Cme03g01617 | 2241 | SMART | pld_4 | 1886 | 1913 | IPR001736 | GO:0003824 | |
| Cme03g01617 | 2241 | Gene3D | Endonuclease Chain A | 1434 | 1681 | - | - | |
| Cme03g01617 | 2241 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 1886 | 1913 | IPR001736 | GO:0003824 | |
| Cme03g01617 | 2241 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 1558 | 1596 | IPR001736 | GO:0003824 | |
| Cme03g01617 | 2241 | Gene3D | Endonuclease Chain A | 1703 | 1930 | - | - | |
| Cme03g01617 | 2241 | SUPERFAMILY | Phospholipase D/nuclease | 1719 | 1969 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme03g01617 | K11699 | RDR, RDRP; RNA-dependent RNA polymerase [EC:2.7.7.48] | - | csv:101217108 | 2378.98 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme01g02610 | Cme-Chr1:33760704 | Cme03g01617 | Cme-Chr3:25062581 | 0 | dispersed | |
| Cme02g01199 | Cme-Chr2:17270241 | Cme03g01617 | Cme-Chr3:25062581 | 6.05E-34 | dispersed | |
| Cme03g01617 | Cme-Chr3:25062581 | Cme07g02065 | Cme-Chr7:25517572 | 0 | dispersed | |
| Cme06g00205 | Cme-Chr6:1256301 | Cme03g01617 | Cme-Chr3:25062581 | 1.53E-07 | dispersed | |
| Cme07g02062 | Cme-Chr7:25505999 | Cme03g01617 | Cme-Chr3:25062581 | 4.80E-18 | dispersed | |
| Cme10g01304 | Cme-Chr10:14177391 | Cme03g01617 | Cme-Chr3:25062581 | 1.84E-28 | dispersed | |
| Cme10g01431 | Cme-Chr10:17267835 | Cme03g01617 | Cme-Chr3:25062581 | 4.00E-11 | dispersed | |
| Cme02g00177 | Cme-Chr2:1367327 | Cme03g01617 | Cme-Chr3:25062581 | 5.11E-18 | transposed | |
| Cme02g01954 | Cme-Chr2:25821307 | Cme03g01617 | Cme-Chr3:25062581 | 3.75E-167 | transposed | |
| Cme03g01540 | Cme-Chr3:24525324 | Cme03g01617 | Cme-Chr3:25062581 | 0 | transposed | |
| Cme04g01195 | Cme-Chr4:16327414 | Cme03g01617 | Cme-Chr3:25062581 | 0 | transposed | |
| Cme05g01583 | Cme-Chr5:25048067 | Cme03g01617 | Cme-Chr3:25062581 | 8.87E-19 | transposed | |
| Cme06g02664 | Cme-Chr6:33733869 | Cme03g01617 | Cme-Chr3:25062581 | 0 | transposed | |
| Cme08g00969 | Cme-Chr8:6372261 | Cme03g01617 | Cme-Chr3:25062581 | 0 | transposed | |
| Cme09g01359 | Cme-Chr9:18784964 | Cme03g01617 | Cme-Chr3:25062581 | 2.77E-177 | transposed | |
| Cme11g02535 | Cme-Chr11:31792866 | Cme03g01617 | Cme-Chr3:25062581 | 0 | transposed | |
| Cme11g02046 | Cme-Chr11:28223054 | Cme03g01617 | Cme-Chr3:25062581 | 2.87E-18 | transposed | |
| Cme03g01617 | Cme-Chr3:25062581 | Cme05g01915 | Cme-Chr5:27841786 | 5.89E-14 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi4g479 | . | . | . | . | Bpe02g01247 | . | . | . | Cmo05g00384 | . | . | Cma05g00383 | . | . | . | . | . | Bhi04g00959 | . | . | . | Hepe10g0254 | . | . | . | . | . | . | . | . | . | . | . | Cone17ag1023 | Cone20ag0669 | . | . | . | Cme03g01617 | . | Blo18g00026 | . | . | . | . | . | . | . | . | . | . | . | . | Car05g00326 | Cpe11g00328 | . | . | . | . | . | . | . | . | Cla08g01332 | Cam08g1794 | Cec08g1373 | Cco08g1502 | Clacu08g1488 | . | Cre08g1276 | Lsi08g01204 | . | Chy03g01122 | . |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cme01g02610 | . | 28 | 844 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 78.4 | 0.0e+00 | 1373.6 | |
| Cme07g02065 | . | 1 | 797 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 74.0 | 0.0e+00 | 1299.6 | |
| Cme03g01617 | . | 1220 | 2032 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 63.2 | 0.0e+00 | 1101.3 | |
| Cme04g01195 | . | 31 | 761 | Phospholipase D Gene Family (Wang group) | AT1G55180 | 60.1 | 1.2e-269 | 926.0 | |
| Cme01g02610 | . | 33 | 844 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 79.0 | 0.0e+00 | 1380.9 | |
| Cme07g02065 | . | 1 | 797 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 74.0 | 0.0e+00 | 1306.6 | |
| Cme03g01617 | . | 1220 | 2032 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 63.8 | 0.0e+00 | 1097.8 | |
| Cme03g01617 | . | 1305 | 2031 | Phospholipase D Gene Family (Wang group) | AT5G25370 | 66.8 | 1.7e-300 | 1028.5 | |
| Cme07g02065 | . | 72 | 797 | Phospholipase D Gene Family (Wang group) | AT5G25370 | 62.9 | 3.4e-288 | 987.6 | |
| Cme01g02610 | . | 119 | 844 | Phospholipase D Gene Family (Wang group) | AT5G25370 | 62.9 | 3.8e-287 | 984.2 | |
| Cme11g02535 | . | 128 | 1103 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 71.4 | 0.0e+00 | 1438.7 | |
| Cme06g02664 | . | 14 | 851 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 68.6 | 0.0e+00 | 1243.8 | |
| Cme03g01540 | . | 4 | 846 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 51.8 | 1.6e-262 | 902.9 | |
| Cme08g00969 | . | 4 | 849 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 51.9 | 1.6e-262 | 902.9 | |
| Cme11g02535 | . | 337 | 1103 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 78.4 | 0.0e+00 | 1260.7 | |
| Cme06g02664 | . | 83 | 851 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 69.0 | 0.0e+00 | 1131.3 | |
| Cme08g00969 | . | 71 | 849 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 54.4 | 8.2e-253 | 870.2 | |
| Cme03g01540 | . | 65 | 846 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 54.3 | 1.7e-250 | 862.4 | |
| Cme11g02535 | . | 275 | 888 | Phospholipase D Gene Family (Wang group) | AT4G11830 | 67.0 | 5.0e-248 | 854.0 | |
| Cme06g02664 | . | 12 | 637 | Phospholipase D Gene Family (Wang group) | AT4G11830 | 64.9 | 2.1e-246 | 848.6 | |
| Cme11g02535 | . | 257 | 1103 | Phospholipase D Gene Family (Wang group) | AT4G11840 | 64.5 | 0.0e+00 | 1146.0 | |
| Cme06g02664 | . | 7 | 851 | Phospholipase D Gene Family (Wang group) | AT4G11840 | 65.4 | 0.0e+00 | 1139.4 | |
| Cme08g00969 | . | 4 | 846 | Phospholipase D Gene Family (Wang group) | AT4G11840 | 51.0 | 2.0e-249 | 859.0 | |
| Cme11g02535 | . | 257 | 1103 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 68.7 | 0.0e+00 | 1211.4 | |
| Cme06g02664 | . | 7 | 851 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 68.3 | 0.0e+00 | 1203.0 | |
| Cme08g00969 | . | 4 | 849 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 51.3 | 5.7e-255 | 877.5 | |
| Cme03g01540 | . | 13 | 846 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 50.2 | 6.3e-246 | 847.4 | |
| Cme08g00969 | . | 1 | 689 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 70.9 | 3.6e-300 | 1027.3 | |
| Cme03g01540 | . | 7 | 675 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 64.1 | 4.3e-269 | 924.1 | |
| Cme11g02535 | . | 282 | 932 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 50.9 | 9.8e-197 | 683.7 | |
| Cme05g01583 | . | 35 | 1109 | Phospholipase D Gene Family (Wang group) | AT3G05630 | 63.0 | 0.0e+00 | 1349.0 | |
| Cme11g02046 | . | 40 | 1113 | Phospholipase D Gene Family (Wang group) | AT3G05630 | 61.5 | 0.0e+00 | 1327.4 | |
| Cme11g02046 | . | 1 | 990 | Phospholipase D Gene Family (Wang group) | AT3G16785 | 73.3 | 0.0e+00 | 1459.1 | |
| Cme05g01583 | . | 22 | 988 | Phospholipase D Gene Family (Wang group) | AT3G16785 | 62.1 | 0.0e+00 | 1203.0 | |
| Cme01g02610 | . | 33 | 844 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 79.0 | 0.0e+00 | 1380.9 | |
| Cme07g02065 | . | 1 | 797 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 74.0 | 0.0e+00 | 1306.6 | |
| Cme03g01617 | . | 1220 | 2032 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 63.8 | 0.0e+00 | 1097.8 | |
| Cme01g02610 | . | 28 | 844 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 78.4 | 0.0e+00 | 1373.6 | |
| Cme07g02065 | . | 1 | 797 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 74.0 | 0.0e+00 | 1299.6 | |
| Cme03g01617 | . | 1220 | 2032 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 63.2 | 0.0e+00 | 1101.3 | |
| Cme11g02535 | . | 128 | 1103 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 71.4 | 0.0e+00 | 1438.7 | |
| Cme06g02664 | . | 14 | 851 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 68.6 | 0.0e+00 | 1243.8 | |
| Cme03g01540 | . | 4 | 846 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 51.8 | 1.6e-262 | 902.9 | |
| Cme08g00969 | . | 4 | 849 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 51.9 | 1.6e-262 | 902.9 | |
| Cme11g02535 | . | 337 | 1103 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 78.4 | 0.0e+00 | 1260.7 | |
| Cme06g02664 | . | 83 | 851 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 69.0 | 0.0e+00 | 1131.3 | |
| Cme08g00969 | . | 71 | 849 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 54.4 | 8.2e-253 | 870.2 | |
| Cme03g01540 | . | 65 | 846 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 54.3 | 1.7e-250 | 862.4 | |
| Cme11g02535 | . | 257 | 1103 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 68.7 | 0.0e+00 | 1211.4 | |
| Cme06g02664 | . | 7 | 851 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 68.3 | 0.0e+00 | 1203.0 | |
| Cme08g00969 | . | 4 | 849 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 51.3 | 5.7e-255 | 877.5 | |
| Cme03g01540 | . | 13 | 846 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 50.2 | 6.3e-246 | 847.4 | |
| Cme11g02535 | . | 275 | 888 | Phospholipase D Gene Family (Wang group) | AT4G11830 | 67.0 | 5.0e-248 | 854.0 | |
| Cme06g02664 | . | 12 | 637 | Phospholipase D Gene Family (Wang group) | AT4G11830 | 64.9 | 2.1e-246 | 848.6 | |
| Cme11g02535 | . | 257 | 1103 | Phospholipase D Gene Family (Wang group) | AT4G11840 | 64.5 | 0.0e+00 | 1146.0 | |
| Cme06g02664 | . | 7 | 851 | Phospholipase D Gene Family (Wang group) | AT4G11840 | 65.4 | 0.0e+00 | 1139.4 | |
| Cme08g00969 | . | 4 | 846 | Phospholipase D Gene Family (Wang group) | AT4G11840 | 51.0 | 2.0e-249 | 859.0 | |
| Cme08g00969 | . | 1 | 689 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 70.9 | 3.6e-300 | 1027.3 | |
| Cme03g01540 | . | 7 | 675 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 64.1 | 4.3e-269 | 924.1 | |
| Cme11g02535 | . | 282 | 932 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 50.9 | 9.8e-197 | 683.7 | |
| Cme04g01195 | . | 31 | 761 | Phospholipase D Gene Family (Wang group) | AT1G55180 | 60.1 | 1.2e-269 | 926.0 | |
| Cme03g01617 | . | 1305 | 2031 | Phospholipase D Gene Family (Wang group) | AT5G25370 | 66.8 | 1.7e-300 | 1028.5 | |
| Cme07g02065 | . | 72 | 797 | Phospholipase D Gene Family (Wang group) | AT5G25370 | 62.9 | 3.4e-288 | 987.6 | |
| Cme01g02610 | . | 119 | 844 | Phospholipase D Gene Family (Wang group) | AT5G25370 | 62.9 | 3.8e-287 | 984.2 | |
| Cme11g02046 | . | 1 | 990 | Phospholipase D Gene Family (Wang group) | AT3G16785 | 73.3 | 0.0e+00 | 1459.1 | |
| Cme05g01583 | . | 22 | 988 | Phospholipase D Gene Family (Wang group) | AT3G16785 | 62.1 | 0.0e+00 | 1203.0 | |
| Cme05g01583 | . | 35 | 1109 | Phospholipase D Gene Family (Wang group) | AT3G05630 | 63.0 | 0.0e+00 | 1349.0 | |
| Cme11g02046 | . | 40 | 1113 | Phospholipase D Gene Family (Wang group) | AT3G05630 | 61.5 | 0.0e+00 | 1327.4 | |
| Cme01g02610 | . | 33 | 844 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 79.0 | 0.0e+00 | 1380.9 | |
| Cme07g02065 | . | 1 | 797 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 74.0 | 0.0e+00 | 1306.6 | |
| Cme03g01617 | . | 1220 | 2032 | Phospholipase D Gene Family (Wang group) | AT3G15730 | 63.8 | 0.0e+00 | 1097.8 | |
| Cme01g02610 | . | 28 | 844 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 78.4 | 0.0e+00 | 1373.6 | |
| Cme07g02065 | . | 1 | 797 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 74.0 | 0.0e+00 | 1299.6 | |
| Cme03g01617 | . | 1220 | 2032 | Phospholipase D Gene Family (Wang group) | AT1G52570 | 63.2 | 0.0e+00 | 1101.3 | |
| Cme03g01617 | . | 1305 | 2031 | Phospholipase D Gene Family (Wang group) | AT5G25370 | 66.8 | 1.7e-300 | 1028.5 | |
| Cme07g02065 | . | 72 | 797 | Phospholipase D Gene Family (Wang group) | AT5G25370 | 62.9 | 3.4e-288 | 987.6 | |
| Cme01g02610 | . | 119 | 844 | Phospholipase D Gene Family (Wang group) | AT5G25370 | 62.9 | 3.8e-287 | 984.2 | |
| Cme04g01195 | . | 31 | 761 | Phospholipase D Gene Family (Wang group) | AT1G55180 | 60.1 | 1.2e-269 | 926.0 | |
| Cme11g02535 | . | 128 | 1103 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 71.4 | 0.0e+00 | 1438.7 | |
| Cme06g02664 | . | 14 | 851 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 68.6 | 0.0e+00 | 1243.8 | |
| Cme03g01540 | . | 4 | 846 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 51.8 | 1.6e-262 | 902.9 | |
| Cme08g00969 | . | 4 | 849 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 51.9 | 1.6e-262 | 902.9 | |
| Cme11g02535 | . | 337 | 1103 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 78.4 | 0.0e+00 | 1260.7 | |
| Cme06g02664 | . | 83 | 851 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 69.0 | 0.0e+00 | 1131.3 | |
| Cme08g00969 | . | 71 | 849 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 54.4 | 8.2e-253 | 870.2 | |
| Cme03g01540 | . | 65 | 846 | Phospholipase D Gene Family (Wang group) | AT4G00240 | 54.3 | 1.7e-250 | 862.4 | |
| Cme11g02535 | . | 257 | 1103 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 68.7 | 0.0e+00 | 1211.4 | |
| Cme06g02664 | . | 7 | 851 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 68.3 | 0.0e+00 | 1203.0 | |
| Cme08g00969 | . | 4 | 849 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 51.3 | 5.7e-255 | 877.5 | |
| Cme03g01540 | . | 13 | 846 | Phospholipase D Gene Family (Wang group) | AT4G11850 | 50.2 | 6.3e-246 | 847.4 | |
| Cme11g02535 | . | 275 | 888 | Phospholipase D Gene Family (Wang group) | AT4G11830 | 67.0 | 5.0e-248 | 854.0 | |
| Cme06g02664 | . | 12 | 637 | Phospholipase D Gene Family (Wang group) | AT4G11830 | 64.9 | 2.1e-246 | 848.6 | |
| Cme11g02535 | . | 257 | 1103 | Phospholipase D Gene Family (Wang group) | AT4G11840 | 64.5 | 0.0e+00 | 1146.0 | |
| Cme06g02664 | . | 7 | 851 | Phospholipase D Gene Family (Wang group) | AT4G11840 | 65.4 | 0.0e+00 | 1139.4 | |
| Cme08g00969 | . | 4 | 846 | Phospholipase D Gene Family (Wang group) | AT4G11840 | 51.0 | 2.0e-249 | 859.0 | |
| Cme08g00969 | . | 1 | 689 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 70.9 | 3.6e-300 | 1027.3 | |
| Cme03g01540 | . | 7 | 675 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 64.1 | 4.3e-269 | 924.1 | |
| Cme11g02535 | . | 282 | 932 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 50.9 | 9.8e-197 | 683.7 | |
| Cme11g02046 | . | 1 | 990 | Phospholipase D Gene Family (Wang group) | AT3G16785 | 73.3 | 0.0e+00 | 1459.1 | |
| Cme05g01583 | . | 22 | 988 | Phospholipase D Gene Family (Wang group) | AT3G16785 | 62.1 | 0.0e+00 | 1203.0 | |
| Cme05g01583 | . | 35 | 1109 | Phospholipase D Gene Family (Wang group) | AT3G05630 | 63.0 | 0.0e+00 | 1349.0 | |
| Cme11g02046 | . | 40 | 1113 | Phospholipase D Gene Family (Wang group) | AT3G05630 | 61.5 | 0.0e+00 | 1327.4 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0006584 | 1 | 7 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 37 |