Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01647 ATGGGGGCTCCGTTCGAGGGAATTGTAAAGGATTTGAAAGGAAGGGCAGCGTGCTATAAACAGGATTGGATATGTGCACTATGTTCAGGCGTCAGGATTTTAGCTCCTACTATGTACATTTTCTTCGCCTCAGCTCTACCTGTTATTGCCTTCGGGGAGCAACTTAGTAGAGATACAGGTGGAAGATTGAGCACTGTGGAAACATTAGCCTCAACTGCGCTGTGTGGAATTATCCACTCAATCTTTGGGGGACAGCCTTTGCTGATTTTAGGTGTGGCAGAACCAACAGTTATAATGTACATTTACTTGTACACTTTCTGCCAAGGCCGGCCAGATTTAGGAGGCGAGCTCTTTATAGCCTGGGCTGGATGGGTGTGCATCTGGACAGGACTATTTCTGATTCTCCTTGCAATCTTTAATGCTTGCAACATCATTACCAAATTTACAAGAGTAGCGGGGGAATTATTTGGCATGCTTATTGCTGTTCTTTTCTTTCAAGAGGCAATAAGGGGACTGATCAGCGAATTCCAGATTCCCAAGTCAGAAAAGCCAGAGCTCTTGGAGTACAAATTTGAATGGTTGTATACAAATGGTTTGCTTGCAATAATTTTTTCTGTCGGTCTACTCTTCACAGCATTGCAAAGCAGAGGTGCAAGATCATGGAAATATGGCACTGGCTGGTTCCGCAGTTTCATTGCAGATTACGGGGTTCCACTTATGGTTGTGTTCTGGACTGCATTGTCATATGGAGTTCCCGGCAAAGTTCCACATGGAGTTCCAAGGAGACTCTTTTGTCCATTACCTTGGGAACCAGCCTCATTGTACCACTGGACTGTAGTGAAGGACATGGGGAAGGTTCCAGTGACTTACATCTTTGCTGCTGCTCTGCCTGCCGTGATGATAGCAGGCCTATACTTTTTTGACCATAGTGTTGCATCACAAATGGCTCAACAGAAAGAGTTTAATCTTCAAAATCCATCTGCATATCACTATGATGTCTTCTTGCTCGGGATTATGACTTTGATTTGTGGATTGATTGGATTGCCTCCTTCTAATGGTGTCCTCCCACAGTCCCCAATGCACACAAAGAGTCTCGCAGTGCTTAAACGTCAGTTGTTTCGAAAAAAAATGGTAAAGAGGGCAAAGGAATGTATCAAACAAAAAGCGAGCAACTCTGAAATTTATGGAAAGATGCAGGCCGTGTTCATTGAAATGGACGCAGCTCCTGTTCCTAAAGATCTAGAAACCTTGACAAAGGCAGTAATGAATGCTGATGAAGGTGCTCAAAAGGGAAAATTCGATGCTGAGAAAAATATCGATCCTTATTTGCCTGTTCGTGTGAATGAGCAAAGAATGAGCAACTTGCTGCAGTCTTTCCTTGTTGCTGCATCAATATTCGCTGTCCCTATAATGAAAATGATACCCACATCAGTTCTTTGGGGATACTTTGCTTACATGGCCATTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATGTTGTTGCTCTTCATTACACCTAGTCGGCGTTTCAAAGTCTTGGAGGGGTCTCATCTATCTTTCGTTGAATCTGTGCCATTCAAGATCATTGCTTCCTTTACGCTCCTTCAGTTTGCCTATTTCTTGTTGTGCTTTGGTGTAACATGGATACCTGTAGCTGGGATCTTGTTCCCACTGCCATTTTTCCTCCTCATTAGCATAAGAGAGCATGTGCTTCCTAAGTTCTTCAAGCATAGCCATCTTCAAGAGTTAGATGCTTCAGAGTATGAGGAGATTGAAGGTGCTGGACATCGCCCCATCAATCTCACAGCACCGGAAAAGGAGCCACCTGATTCAATTGCGGCAGAGAGCAATGAAGAATACTACGATGCCGAGATATTAGATGAGATGACAACTCATAGAGGAGAATTAAAGCTTAGAACTGTTCATCCTGAAGATTCCCTTCGAATGTGA 1953 43.68 MGAPFEGIVKDLKGRAACYKQDWICALCSGVRILAPTMYIFFASALPVIAFGEQLSRDTGGRLSTVETLASTALCGIIHSIFGGQPLLILGVAEPTVIMYIYLYTFCQGRPDLGGELFIAWAGWVCIWTGLFLILLAIFNACNIITKFTRVAGELFGMLIAVLFFQEAIRGLISEFQIPKSEKPELLEYKFEWLYTNGLLAIIFSVGLLFTALQSRGARSWKYGTGWFRSFIADYGVPLMVVFWTALSYGVPGKVPHGVPRRLFCPLPWEPASLYHWTVVKDMGKVPVTYIFAAALPAVMIAGLYFFDHSVASQMAQQKEFNLQNPSAYHYDVFLLGIMTLICGLIGLPPSNGVLPQSPMHTKSLAVLKRQLFRKKMVKRAKECIKQKASNSEIYGKMQAVFIEMDAAPVPKDLETLTKAVMNADEGAQKGKFDAEKNIDPYLPVRVNEQRMSNLLQSFLVAASIFAVPIMKMIPTSVLWGYFAYMAIDSLPGNQFWERMLLLFITPSRRFKVLEGSHLSFVESVPFKIIASFTLLQFAYFLLCFGVTWIPVAGILFPLPFFLLISIREHVLPKFFKHSHLQELDASEYEEIEGAGHRPINLTAPEKEPPDSIAAESNEEYYDAEILDEMTTHRGELKLRTVHPEDSLRM 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25276474 25280979 - MELO3C011232.2.1 Cme03g01647 323658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01647 650 Pfam HCO3- transporter family 4 177 IPR011531 GO:0006820|GO:0016021
Cme03g01647 650 Pfam HCO3- transporter family 445 535 IPR011531 GO:0006820|GO:0016021
Cme03g01647 650 Pfam HCO3- transporter family 197 370 IPR011531 GO:0006820|GO:0016021
Cme03g01647 650 PANTHER BORON TRANSPORTER 6-RELATED 3 646 - -
Cme03g01647 650 Gene3D Helical hairpin bin 15 57 - -
Cme03g01647 650 PANTHER ANION EXCHANGE PROTEIN 3 646 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01647 Cme-Chr3:25276474 Cme04g01067 Cme-Chr4:14530154 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01647 K24194 - csv:101220188 1269.99