Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01702 ATGACGGCACCGGTGTCGGTTGATGGGAAAGGGAAGAAGAATATTGAGAATTTGGTGTCTGCTACTAGGTCATTGAAGGCTAGCTTAGAGAAATCTAGGACTCTAGGGTTTTCTTTGCAGAAAGCTGGGCCGAGATTGGAGGAGATTAGGCAAAGATTGCCGACTTTAGAAGCGGCGGTTCGGCCTATTCGTGCTGATAAGGAAGCCCTTGTTGCCGTCGGTGGCCATATAAATCGGGCTGTTGGCCCGGCCGCGGCGGTGCTCAAGGTTTTCGATGCAGTTCATGGCCTTGAAAAATCTCTATTATCGGACCCGCGGAATGATCTTCATGGGTATTTGTCTGTGTTGAAACGTATGGAAGAGGCATTGAGGTTTTTGGGAGATAACTGTGGACTGGCAATCCAGTGGTTGGAGGACATTGTTGAGTATTTGGAAGATAATACTGTGGCGGATGAGAAATATCTAGCGAGTTTGAAGAGTTCATTGAAAAATCTTAGGGATTTGCAGAGTGATGAAGGGAGGACTCGGCTTGATGGGGGACTTCTGAATGCTGCTTTAGATAAACTCGAGAACGAGTTTAGGCGGCTTTTAACGGAGCACAGTGTACCTCTTCCAATGTCTTCTTCGGCGTCTCCAGGTGAACAAGCTTGCATTGCTCCATCTCCGTTGCCTGTAACTATCATTCCAAAATTGCAAGCCATTCTTGGGAGATTGATTGCTAATAAACGACTTGAGAGTTGCATATCGATTTATGTTGAAGTTCGTAGTTCTAATGTTAGGGCTAGTTTGCAGGCTCTTGATTTGGATTACTTGGAGATATCTGTTTCTGAGTTCAATGATGTGCTGAGCATCGAAGGGTACATTGCAAAATGGGGAAAGCATTTGGAGTTTGCAGTGAAACACTTGTTTGAGGCCGAGTTCAAGCTTTGTAATGACGTTTTCGAGAGGATTGGATTGGATGTTTGGATGGGGTGTTTTGCAAAGATAGCAACTCAAGCAGGTATTCTTGCATTTCTTCAATTTGGGAAAACTGTAACAGAAAGCAAGAATGATCCTATCAAGCTACTGAAGTTGTTAGATATATTTGCATCCTTGAACAAACTGAGACTAGACTTCAATAGGCTTTTTGGTGGGGCGGCCTGTTTGGAAATTCAAAACTTGACTAGGGATCTCATTAAGCGGGTTATTGATGGTGCGGCCGAGATTTTCTGGGAACTTCTAGTTCAGGTGGAGCTCCAGAGGCAAAATCCTCCGCCTTTAGATGGGGGAGTTCCACGATCGGTTAGCTTCATTATTGATTACAGTAACAAACTACTCTCTGACGATTATCGGCCGATCCTGACCCAGGCCCTCGTCATTCACCGGAGTTGGAAGAAAGAAAAGTTCCAAGAGGGTCTACTTGTCAGTGAGGTAACGAACCTTGTTAAAGCTATTGAGCATAATCTGGAAACTTGGATAAAGGCTTATGAAGATTCTACCTTGTCAAACTTTTTCGCTATGAACAATCATTGGCATCTATACAAGCACCTCAAAGGAACAAAAGTCGGAGAACTAATGGGAGATAAACTGAAGGAACATGAACAATACAAGGATTACTATGCTGCAGTTTTCTTGAGGGAGAGCTGGAGTAAACTTCCTAGCCATTTAAGCAGAGAGGGTTTGATTATGTTCTCGGGTGGCCGAGCTACTGCTCGTGATCTCGTCAAGAAACGTCTAAAGACATTCAACGAAGCTTTTGAAGACATGTATAAGAAGCAGTCAAACTGGGTTATGACTGACAAAGAGTTGAGGGAGAAGACATGTCAACTTATAGTTCAAACCATCGTGCCCGTTTATCGCAGTTACATGCAGAATTACGGCCCCTTGGTCGAGCAAGATCCGAGTTCCAGTAAGTATGTCAAGTACACCGTGCAGAATCTGGAGAAAATGTTATTGTCCCTATTTCAGCCAAAGCCACTTAGGTACAGTAGTCTTAAAGTTAGGCAGACCAGTGGGAAATTCAGCAATGGCGCAGCAGATCATCGTCGTTCCAACTCCATGGTTATGTAA 2049 44.17 MTAPVSVDGKGKKNIENLVSATRSLKASLEKSRTLGFSLQKAGPRLEEIRQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLHGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNTVADEKYLASLKSSLKNLRDLQSDEGRTRLDGGLLNAALDKLENEFRRLLTEHSVPLPMSSSASPGEQACIAPSPLPVTIIPKLQAILGRLIANKRLESCISIYVEVRSSNVRASLQALDLDYLEISVSEFNDVLSIEGYIAKWGKHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNPPPLDGGVPRSVSFIIDYSNKLLSDDYRPILTQALVIHRSWKKEKFQEGLLVSEVTNLVKAIEHNLETWIKAYEDSTLSNFFAMNNHWHLYKHLKGTKVGELMGDKLKEHEQYKDYYAAVFLRESWSKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSNWVMTDKELREKTCQLIVQTIVPVYRSYMQNYGPLVEQDPSSSKYVKYTVQNLEKMLLSLFQPKPLRYSSLKVRQTSGKFSNGAADHRRSNSMVM 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25682121 25685170 - MELO3C011181.2.1 Cme03g01702 323713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01702 682 Pfam Exo70 exocyst complex subunit 290 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cme03g01702 682 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 671 IPR004140 GO:0000145|GO:0006887
Cme03g01702 682 Gene3D Exocyst complex component Exo70 137 655 - -
Cme03g01702 682 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 14 671 - -
Cme03g01702 682 SUPERFAMILY Cullin repeat-like 87 648 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g02744 Cme-Chr1:34624839 Cme03g01702 Cme-Chr3:25682121 0 dispersed
Cme03g01702 Cme-Chr3:25682121 Cme03g02110 Cme-Chr3:28354220 1.08E-70 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01702 K07195 - csv:101207478 1338.17