Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01705 ATGTGGAATCAGAAGCAATCCATTGGTAAGGAAAGGAAAGAGCTATCCACTGCCAATCAATTGGTGAGTATTGCCGTTGATAAGGATAAAGGAAGTCAACTTGCTCTTAAATGGGCCACTGAGAATCTCCTTGTAAAAGGCCAAACTGCCATCCTCATCCATGTTAAACTCAAATCTTCCACTTATTCTGGCTCTTCCATGGCTTCCCCTAAGGTGATGTCGGCATCAGACGCCGGCAATGTCAATGGCAATGTTTTGGTAAGCAAGGATATCGATCCGAGCACAAGGGATTTGTTCCTTCCTTTTCGCTGCTTCTGTACGCGTAAAGATATATTTTGCAAAGACATCGTTGTTGAAGATTTAGATGTTGCAAAAGCGTTGATTGAATATGTCACTCAGGCTGGAATTGAGAATTTGGTCGTTGGTTCCACATCTAAAAGTAGCTTCTTGAGAAGATTGAAGACAACAGATATTCCAGGCAGTGTTGTCAAAGGAGCACCAGATTTCTGCAATGTTTATGTCATATCAAGATCGAAAATCCAAACAATGCGATCAGCCTCACGTCCTGCTCCAGTTTCATCTCCTCTTCGAAGTTTATTGCTGAGCCAAACTGTTATCAAATCACAATCAGCCGAGTCACTAGTTCCTCAGATTCAAACGAGACCTGAAAAGCCTCCCCTTGAAGCAGCACGTAGATCTCAGGACAACATCGAGTTCAGGTCACCGTTCACTAGGAAAGGCTACAATGGAAAAATGCCAGGGGAAGTCACTCTGCCAGATACGGATATTTCTTTCGTTAGCTCGGGAAGGCCGAGTGTTGACCGATTATTCCCTACATTGTTTGACAATGCGGATACTGGAAGGGTTCCCCCACGACTGTCCAGTGGCAATGATGCTGAATTATATAATAGCTTTGAGTCACAGCAACTTGGACGCAAATCATTGGATGGACGCAAATCATTGGATGGACGCAAATCCCTGGATGGACGCAAACGATGGAAATCTGAGGAGGAACGAAGAATAGAGGAGGCAAGATTTGCAGAGGAAGCTGCTTTAGCCATGGTTGAGCAGGAAAAGGCAAAATCTAGAGCCGCTATTGAGGCCGCTGAAGCTGCTAAAAGGATAGCTGAGTTGGAAGCACAGAAGAGAATTAATGCAGAAAAAAAAGCATTCAAGGAAGCAGAAGAGAAGAAGAAGGCATTAGATGCTTTGGCTAACAATGATGTCAGGTATCGGAAGTACTCGATCGAAGAGATTGAAACTGCTACTGAGTTTTTTTCAGAATCTTTAAAGATTGGAGAGGGAGGCTATGGGCCTGTTTATAAAGGTTATTTGGACCACACAGCAGTTGCAATCAAGGTCTTACGTCCGGATGCGGCTCAAGGAAGGTCACAGTTCCAGCAAGAGGTCGAAGTACTAAGCTGCATACGACATCCTAACATGGTTCTTCTCCTTGGAGCATGCCCTGAATATGGCTGCTTGGTCTATGAGTTCATGGCACATGGGAGCTTGGATGACTGCCTCTTTCGCCGGGGAGAAAATTCAAAACCTCTTTCTTGGCAGCGTAGATTCAAAATTGCAGCTGAAATTGGCACTGCCTTGTTGTTCCTCCATCAGACTAAGCCTGAGCCTCTTGTGCATCGTGATTTGAAACCAGCCAACATCTTGCTCGATTGTAATTACGTTAGCAAGATTAGCGATGTTGGTTTGGCCAGGCTTGTTCCCCCATCTGTAGCAGACAGTGTGACACAATATAGAATGACTTCAACTGCCGGCACGTTCTGTTATATCGATCCTGAGTATCAACAAACCGGCATGCTCGGCGTAAAGTCCGACATATATTCTTTGGGAATAATGTTTTTGCAGTTGATTACAGCAAGGGCACCCATGGGATTGACTCACCATGTGGGAAGAGCTATTGAGAAAGGGACTTTGTCCGAAATTCTTGATCCATCCGTTACCGATTGGCCAGCTGAGGAAACGTTGTGCTTTGCTAAGTTGGCTTTAAAATGTGCAGAGTTGAGAAGAAAAGACCGGCCTGATCTTGGTAAGGTTGTTCTCCCAGAACTCATCAGATTTCAATCGGTAGCCGAAGCCGGCATTGCATTCGTTCTGGGGATGGACAGTGTTAACAGTCCTGAGTTCAGCCGCAGTCAGGCTTCTACGAGAAGAGTAAGCTAA 2181 45.07 MWNQKQSIGKERKELSTANQLVSIAVDKDKGSQLALKWATENLLVKGQTAILIHVKLKSSTYSGSSMASPKVMSASDAGNVNGNVLVSKDIDPSTRDLFLPFRCFCTRKDIFCKDIVVEDLDVAKALIEYVTQAGIENLVVGSTSKSSFLRRLKTTDIPGSVVKGAPDFCNVYVISRSKIQTMRSASRPAPVSSPLRSLLLSQTVIKSQSAESLVPQIQTRPEKPPLEAARRSQDNIEFRSPFTRKGYNGKMPGEVTLPDTDISFVSSGRPSVDRLFPTLFDNADTGRVPPRLSSGNDAELYNSFESQQLGRKSLDGRKSLDGRKSLDGRKRWKSEEERRIEEARFAEEAALAMVEQEKAKSRAAIEAAEAAKRIAELEAQKRINAEKKAFKEAEEKKKALDALANNDVRYRKYSIEEIETATEFFSESLKIGEGGYGPVYKGYLDHTAVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMAHGSLDDCLFRRGENSKPLSWQRRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDCNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITARAPMGLTHHVGRAIEKGTLSEILDPSVTDWPAEETLCFAKLALKCAELRRKDRPDLGKVVLPELIRFQSVAEAGIAFVLGMDSVNSPEFSRSQASTRRVS 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25699444 25703852 - MELO3C011178.2.1 Cme03g01705 323716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01705 726 Pfam Universal stress protein family 24 153 IPR006016 -
Cme03g01705 726 CDD STK_N 21 177 - -
Cme03g01705 726 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 13 322 - -
Cme03g01705 726 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 331 724 - -
Cme03g01705 726 PANTHER OS02G0152300 PROTEIN 13 322 - -
Cme03g01705 726 PANTHER OS02G0152300 PROTEIN 331 724 - -
Cme03g01705 726 SUPERFAMILY Protein kinase-like (PK-like) 410 686 IPR011009 -
Cme03g01705 726 Coils Coil 352 407 - -
Cme03g01705 726 Gene3D Transferase(Phosphotransferase) domain 1 499 698 - -
Cme03g01705 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 545 557 IPR008271 GO:0004672|GO:0006468
Cme03g01705 726 Pfam Protein kinase domain 428 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme03g01705 726 Gene3D HUPs 20 175 IPR014729 -
Cme03g01705 726 Gene3D Phosphorylase Kinase; domain 1 404 498 - -
Cme03g01705 726 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 174 - -
Cme03g01705 726 SMART serkin_6 426 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme03g01705 726 ProSiteProfiles Protein kinase domain profile. 426 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g01299 Cme-Chr1:16365037 Cme03g01705 Cme-Chr3:25699444 0 dispersed
Cme03g01705 Cme-Chr3:25699444 Cme05g01224 Cme-Chr5:19805120 7.91E-40 dispersed
Cme03g01705 Cme-Chr3:25699444 Cme04g00320 Cme-Chr4:2501637 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64757 PF00069 Pkinase 5.50E-38 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01705 - - cmo:103488560 1318.52