Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01774 ATGGCGGTGCCGGAGTCGTCTGAGGGCCACCGTACGGCTTCTCGGCGAGCAAATCGACCGCTTGTCGGACCTAGGGTTCCACTGAGACGGTTACTAAGAGTCGCATCTGTCGCATGTGGAATTCAATTCGGTTGGGCTTTGCAGCTTTCTCTTCTCACTCCTTATATTCAAGAGCTTGGTATTCCTCACGCTTGGTCTAGTCTCATATGGCTCTGTGGACCGATTTCTGGTCTCTTTGTTCAACCGCTCGTTGGTCATATGAGCGATCACTGCACCAGCCGATACGGTCGTCGGAGGCCGTTCATCGTCGCTGGAGCGCTTTCTATAGTACTCGCTGTTTTGATTATTGGCCACTCTGCAGACCTCGGTTGGTGGATTGGTGACAGAGGTGATGTTAGACCTCGTGCGATTGTATTCTTTGTGATTGGCTTCTGGATTCTCGATGTAGCTAACAACGTTTCCCAAGGTCCTTGTAGAGCTCTGCTTGCTGATCTTACCGGAAAGGATCATCGAAGGAATCGAGTGGCAAATGCTTATTTTTCTCTATTTATTGCTGTTGGCAATATTTTTGGATATGCAACTGGATCTGTTAGTGGCTGGTACAAGATCTTCCCATTTACTCTCACCTCTGCATGTTCTGTTAATTGTGCAAATCTCAAGTCAGCTTTCTTGATTGATATCGTGTTCATTGCAATTACAACATATTTGAGTGTATCAGCAGCTCAAGAGATACCTCTAGTTTCAAACGGTAGGCCCTCCCTGGTTTTAGAAGAAAGTATGGGGGAGTCAGGTCATGCTTCAGAAGCATTTTTCTGGGACTTGTTTCACACTTTTAGACACTTCTCTGGGTATATATGGGTAATTTTGCTTGTCACTTCCCTGACATGGATAGCATGGTTTCCATTTATTCTCTTTGATACTGATTGGATGGGTAGAGAGATTTATGGTGGCAAGCCAAATGAAGGACAGACTTATAGTTTGGGAGTCAGAATGGGAGCATTTGGTCTGACGTGTAACTCTGTTGTCCTCGGAATAACTTCATTACTTATGGAGAAGCTGTGCAGAAAGTGGGGTGCTGGTTTCATATGGGGAATCTCTAATATTTTCATGGCTATATGTTTTCTTACTATCCTGGTTGTTACGTATGTGGCAAACAATATGGGCTATATAGGTCATGATCTCCCACCAAAGAGTATTTTATCAGCAGCATTGATTATCTTTGCTCTTCTTGGCGCCCCTTTGGCAATTACTTATAGTGTTCCATATGCCATGATCTCCTCACGCGTTGAATCTTTACAACTTGGTCAAGGTTGTGGTGTCCCTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGTGGAAACTCTCCAGCTTTTGCTGTGGCAGCACTTGCAGCTTTTGCAAGTGGACTCATTGCCATCTTGGCTCTTCCTCGGTCTGGTGCTCAGAACCCCAGAAACCTCACATGAGAGAGTTCTGGTGTTTGATACTTACCCTTCACCTACATCAACTGATAGAGCCAAAGACACATGGGATCTGA 1539 45.48 MAVPESSEGHRTASRRANRPLVGPRVPLRRLLRVASVACGIQFGWALQLSLLTPYIQELGIPHAWSSLIWLCGPISGLFVQPLVGHMSDHCTSRYGRRRPFIVAGALSIVLAVLIIGHSADLGWWIGDRGDVRPRAIVFFVIGFWILDVANNVSQGPCRALLADLTGKDHRRNRVANAYFSLFIAVGNIFGYATGSVSGWYKIFPFTLTSACSVNCANLKSAFLIDIVFIAITTYLSVSAAQEIPLVSNGRPSLVLEESMGESGHASEAFFWDLFHTFRHFSGYIWVILLVTSLTWIAWFPFILFDTDWMGREIYGGKPNEGQTYSLGVRMGAFGLTCNSVVLGITSLLMEKLCRKWGAGFIWGISNIFMAICFLTILVVTYVANNMGYIGHDLPPKSILSAALIIFALLGAPLAITYSVPYAMISSRVESLQLGQGCGVPGKWTMGSAVWWWKLSSFCCGSTCSFCKWTHCHLGSSSVWCSEPQKPHMREFWCLILTLHLHQLIEPKTHGI 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26210062 26218818 + MELO3C011115.2.1 Cme03g01774 323785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01774 512 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 10 439 - -
Cme03g01774 512 Pfam MFS/sugar transport protein 44 180 - -
Cme03g01774 512 SUPERFAMILY MFS general substrate transporter 29 440 IPR036259 -
Cme03g01774 512 TIGRFAM GPH_sucrose: sucrose/H+ symporter 26 438 IPR005989 GO:0005887|GO:0008515|GO:0015770
Cme03g01774 512 CDD MFS_SLC45_SUC 31 437 - -
Cme03g01774 512 Gene3D MFS general substrate transporter like domains 28 467 IPR036259 -
Cme03g01774 512 PANTHER SUGAR TRANSPORTER 10 439 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01774 Cme-Chr3:26210062 Cme09g00738 Cme-Chr9:8711282 1.85E-124 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01774 K15378 - csv:101220384 824.313