Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01806 ATGGTTCATCCTGGTTCGACCCAATTTTCACATAAATTGGGGATTCAAAGTGTTCATGGATGCAATAAGTTACATATTAGTGTCAAGGGAAAGACTCGTCTACATCTTGTTACTGTCGTTCCTACATCACATGGTCTGAGGCACAATCCTGGAAGTCTTCAGCTCTTACGGAGTGTAAGTCGCCCAATGTATCCTGTGTCTTCCAGAGCAAATGTTTTTGTGTGTCGATCTGTTCTAGAATCAGGTGGCGGAGCTGGGACTGCTGTTCTAAAGTCTGCAGCTGTGGTTTTGACGAGATCTTGTGATGCCTTACGTAGCAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGTGTCATTGCTTTTGCTGCTTGGGGTATTGGACCTCTTATGCGCTTGGGGAGGATTCTATTTCTTCATGAGCCAGATGGAAGTTGGAAGAAAAGTAGTACATACTATGTTACGACTTCTTATGTTCAACCTCTACTGCTATGGACTGGAGCTACGCTGATCTGCAGGGCATTGGATCCAGTAGTTTTACCATCGGTAGCCAGTCAGGCTGTCAAACAACGACTTCTGAATTTTGTTAGATCTTTGTCTACTGTTCTGGCATTTGCCTATTGTCTATCAAGCTTGATTCAACAAGTACAAAAGTTTGCTTATGAATCAAATGACTCAAGTGATGCAAGAAATATGGGCTTTGATTTTGCCGGGAAAGCTGTTTACACTGCAGTCTGGATTGCTGCCCTTTCATTGTTCATGGAATTGCTCGGCTTTTCTACTCAGAAGTGGCTCACTGCCGGAGGTCTCGGGACTGTATTGCTTACTCTTGCTGGTCGTGAGATATTTACTAACTTCCTTTCAAGTGTAATGATTCATGCAACACGACCGTTTGTGGTAAATGAATGGATTCAAACAAAGATTGATGGATATGAAGTATCAGGAACGGTTGAGCATGTTGGTTGGTGGTCGCCAACCATCATCCGAGGCGATGATCGTGAAGCGGTCCATATTCCTAATCACAAATTCACTGTTAGTATTGTGAGGAATCTTACCCAGAAGACTCATTGGCGTATCAAGACTCATCTTGCCATCAGCCACTTAGATGTCAATAAGATCAATTATATTGTAGCTGACATGCGCAAAGTTTTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGTAGAATTTTTTTGGATAACGTCAATCCTGAAAACCAGGCTCTTATGATCATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAATACCTGTGTGTGAAGGAGGCAATTCTCTTGGATCTTCTCAGAGTTATCAGCCATCATAGGGCCCGGCTTGCCACTCCTATTCGCACTGTTCAGAAAATATATGGCGAGGCTGATTTGGAGAACGTACCATTTTCTGAGACCATGTATTCTCGTTCAGGGGCTACTAACCGTCCTCTGCTTCTTATTGAGCCATCTTATAAAGTCAATGGTGATGACAAAACAAAAGTCTCTAGTCGTCCCACTCGTTCATCAACTGAAGAAAAGGAAGCCAAACAAGAGGCAGTCTCGACGTCAGGGACAAAAGCCCCCGACACAACTGGACCAACTTCAAATCTTGATATGAAAGCAGATGATAAAAAATCAATTTCTCCATCTGGTACTACACCTAAGCCTTCAGCCCCCAATCTATCAACCGGCAGTCCAGAACAAAGCAGTGCGGAAAAGCCAGTAACAAGCAATGAGATAAAAGGAGAAAAGAAAGATCTCTTGGGACTGAATTCCAAAGACAACATGCCACGAGGAACTCCGCCCAAAAGATCGCCTTCAGCTTCCAGTCCTGGGAGCGAGAAAGCTGATATTCCTTCAACAAGCTCGCAAAATAAGCAAGATGGGGAGAAGACGTCTGCATCACCATCAGTGGTGAGGCCACCATTGGAGGAGAATATTGTGCTGGGAGTTGCCTTGGAAGGTTCCAAAAGAACTCTTCCAATTGATGAAGATTTGGATTCAAAAGAAATTTCCACGCAGAGGAATGGGAGTGAGTTTCCCCCCAACAGTAAGGATTTGAAAGATGGTCAAATGCCTGCCGTTCCAGGTGCGACGAAAAATGATTGA 2112 43.66 MVHPGSTQFSHKLGIQSVHGCNKLHISVKGKTRLHLVTVVPTSHGLRHNPGSLQLLRSVSRPMYPVSSRANVFVCRSVLESGGGAGTAVLKSAAVVLTRSCDALRSSPLLLKLIPAACVIAFAAWGIGPLMRLGRILFLHEPDGSWKKSSTYYVTTSYVQPLLLWTGATLICRALDPVVLPSVASQAVKQRLLNFVRSLSTVLAFAYCLSSLIQQVQKFAYESNDSSDARNMGFDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNVNPENQALMIMVSCFVKTSRFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYGEADLENVPFSETMYSRSGATNRPLLLIEPSYKVNGDDKTKVSSRPTRSSTEEKEAKQEAVSTSGTKAPDTTGPTSNLDMKADDKKSISPSGTTPKPSAPNLSTGSPEQSSAEKPVTSNEIKGEKKDLLGLNSKDNMPRGTPPKRSPSASSPGSEKADIPSTSSQNKQDGEKTSASPSVVRPPLEENIVLGVALEGSKRTLPIDEDLDSKEISTQRNGSEFPPNSKDLKDGQMPAVPGATKND 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26454858 26461518 - MELO3C011088.2.1 Cme03g01806 323817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01806 703 MobiDBLite consensus disorder prediction 494 520 - -
Cme03g01806 703 Gene3D - 298 353 IPR023408 -
Cme03g01806 703 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Cme03g01806 703 MobiDBLite consensus disorder prediction 603 635 - -
Cme03g01806 703 MobiDBLite consensus disorder prediction 491 703 - -
Cme03g01806 703 MobiDBLite consensus disorder prediction 547 577 - -
Cme03g01806 703 Gene3D - 192 296 - -
Cme03g01806 703 MobiDBLite consensus disorder prediction 578 592 - -
Cme03g01806 703 MobiDBLite consensus disorder prediction 521 538 - -
Cme03g01806 703 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Cme03g01806 703 MobiDBLite consensus disorder prediction 659 673 - -
Cme03g01806 703 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 695 IPR045042 -
Cme03g01806 703 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 695 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01806 Cme-Chr3:26454858 Cme06g02224 Cme-Chr6:28835312 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01806 K22047 - csv:101213477 1344.72