Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01852 ATGGCTGCCGCTCCCTCTGTTCGCGAGGAGAATGTTTACATGGCTAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCTCTCGACAAGGAGGAACTCACCGTCGAGGAGAGAAACCTTCTTTCTGTCGCTTACAAGAACGTCATCGGCGCTCGTAGGGCCTCCTGGCGTATCATTTCCTCCATCGAACAGAAGGAGGAGAGCCGAGGTAACGATGACCATGTCTCTGTGATCCGTGACTACAGATCCAAAATTGAGACCGAACTCTCCAATATTTGCGATGGAATCCTTAAGCTTCTTGATTCTAGACTCATTCCCTCCGCTGCTTCCGGAGATTCCAAGGTTTTTTACCTCAAAATGAAGGGCGATTACCATAGATACCTTGCCGAGTTCAAAACCGGAGCCGAACGTAAGGAAGCTGCTGAAAGTACTCTCACTGCTTACAAAGCCGCTCAGGACATTGCCAATGCTGAGTTGCCTCCTACACATCCGATCCGACTTGGATTGGCACTTAACTTCTCTGTATTTTATTATGAAATTTTGAATTCCCCTGATCGTGCCTGCAGTCTTGCGAAACAGGCGTTTGATGAAGCTATCGCCGAGTTGGATACCCTTGGCGAGGAATCCTACAAAGATAGTACTTTGATCATGCAGCTTCTTCGCGATAATCTCACTCTCTGGACATCGGACATGCAGGATGATGGGGCTGATGAGATTAAAGAAGCTCCACCGAAGCGTGAGGATGAAAAGCAGTGA 786 49.11 MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASLDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26800080 26802271 - MELO3C011041.2.1 Cme03g01852 323863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01852 261 MobiDBLite consensus disorder prediction 242 261 - -
Cme03g01852 261 SMART 1433_4 8 251 IPR023410 -
Cme03g01852 261 PANTHER 14-3-3 PROTEIN 5 253 IPR000308 -
Cme03g01852 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Cme03g01852 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Cme03g01852 261 Coils Coil 14 41 - -
Cme03g01852 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cme03g01852 261 Gene3D - 2 251 IPR036815 -
Cme03g01852 261 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 253 - -
Cme03g01852 261 MobiDBLite consensus disorder prediction 243 261 - -
Cme03g01852 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cme03g01852 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cme03g01852 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cme03g01852 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cme03g01852 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cme03g01852 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cme03g01852 261 PIRSF 14-3-3 2 250 IPR000308 -
Cme03g01852 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01852 Cme04g00274 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01852 Cme-Chr3:26800080 Cme04g00247 Cme-Chr4:1948190 3.78E-138 dispersed
Cme07g01081 Cme-Chr7:13451281 Cme03g01852 Cme-Chr3:26800080 2.55E-164 transposed
Cme03g01852 Cme-Chr3:26800080 Cme04g00274 Cme-Chr4:2168966 9.53E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01852 K06630 - csv:101220164 508.834