Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01863 ATGGAGAAGGAGAGGGAGCACCTTGTTTACTTAGCCAGACTTGCAGAACAGGCTGAGAGATATGATGAAATGGTGGAAATGATGAAGAACGTCGCAAAGTTGGACGTGGAACTTACTGTGGAGGAGAGGAACCTGGTGTCTGTGGGGTATAAGAACGTTATTGGGGCAAGAAGAGCCTCATGGCGTATTTTATCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAACGAGGTTAATGTGAAGAGAGTAAAAGAGTACAGGCAAAGGGTTGAAGATGAACTGGCGAGAATTTGCCAAGATATCTTAACTGTTGTCGACAAGCATCTTATTCCATCTTCATCGTCTGGAGAATCCAATGTCAGAGCACTAACTTTAAAAGTCCATGAATTGGGGGATTATAACCGATACTTAGCGGAGTTTAAATCTGGCCCTGAACGTGAAGAAGCTGCAGACCAGTCGATGAAAGCCTATGAGTCTGCTTCAAGCATTGCAAGTTCTGATCTGCCTCCAACACATCCCATCAGACTTGGCTTGGCGCTTAACTTTTCTGTTTTTTACTATGAGATATTGAATTCCCCAGAGAGGGCATGCCACCTTGCTAAACAAGCTTTTGATGAAGCCATAGCTGAACTTGATGGCCTCAATGAAGATTCCTACAAGGACAGTACCCTCATTATGCAGCTGCTGAGGGATAATCTCACATTATGGACCTCAGATCTCCCAGATGAGGGAGACTTTAAAGTGGTGAGCAATCTAAAGCTGCTGATGAACCTTGAGCAGAGGCAACTAGCAAGATATTTGAATGTCTTCGGTCAGCCGATGGACATTTTTTTAAGAGTTGGATTACTCACCTTTTCAATCTGTGACCCAATTCTACTGGAAATACTTGATCATGTTCTCCCCACATTATCAACGTCCGCTGCAAGCAAGGCAGATAAAATATTTCTGTCTGTTTGA 957 43.26 MEKEREHLVYLARLAEQAERYDEMVEMMKNVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEVNVKRVKEYRQRVEDELARICQDILTVVDKHLIPSSSSGESNVRALTLKVHELGDYNRYLAEFKSGPEREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDGLNEDSYKDSTLIMQLLRDNLTLWTSDLPDEGDFKVVSNLKLLMNLEQRQLARYLNVFGQPMDIFLRVGLLTFSICDPILLEILDHVLPTLSTSAASKADKIFLSV 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26886991 26890389 + MELO3C011028.2.1 Cme03g01863 323874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01863 318 SMART 1433_4 5 250 IPR023410 -
Cme03g01863 318 Coils Coil 11 31 - -
Cme03g01863 318 Gene3D - 1 250 IPR036815 -
Cme03g01863 318 PRINTS 14-3-3 protein zeta signature 183 209 IPR000308 -
Cme03g01863 318 PRINTS 14-3-3 protein zeta signature 210 239 IPR000308 -
Cme03g01863 318 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Cme03g01863 318 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Cme03g01863 318 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Cme03g01863 318 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cme03g01863 318 Pfam 14-3-3 protein 11 237 IPR023410 -
Cme03g01863 318 ProSitePatterns 14-3-3 proteins signature 2. 219 238 IPR023409 -
Cme03g01863 318 PANTHER 14-3-3 PROTEIN 2 245 IPR000308 -
Cme03g01863 318 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 2 245 - -
Cme03g01863 318 SUPERFAMILY 14-3-3 protein 4 239 IPR036815 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01863 Cme04g00285 CCT
Cme03g01863 Cme04g00285 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01863 Cme-Chr3:26886991 Cme07g01081 Cme-Chr7:13451281 4.63E-118 dispersed
Cme01g00322 Cme-Chr1:2433085 Cme03g01863 Cme-Chr3:26886991 4.89E-139 transposed
Cme03g01448 Cme-Chr3:23809227 Cme03g01863 Cme-Chr3:26886991 2.22E-124 transposed
Cme10g00363 Cme-Chr10:2337132 Cme03g01863 Cme-Chr3:26886991 1.46E-137 transposed
Cme03g01863 Cme-Chr3:26886991 Cme04g00285 Cme-Chr4:2243873 2.15E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01863 K06630 - csv:101222677 434.106