Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01909 ATGGGGCAAGTGCACGGAAGTCAACTCTTGCAGACGATTGGTCATCAATATGAGCTGTGGAATCTTCTGGTAAAGAAGGAAAAATCTGTTTACCACACTTTGAATATGCTCAGTGTTGATGTTACAAAGAAATGCCTTGTAGGTGAAGGATGGTGCCCTGTTTTTGCAACAAATCAGATTCAAAGTGTGATGCAAAAGGCAACCCTCGACAGCAAATCACAAATCGAGGCTATCTTTCATGTTTTGGATACAAAGGAAGCGCCACCAACATATTTCCGCACAAACAAATTTACTTCTTCGTTCCAAGAAATCGTGGATGCATATGGGGTTGCTAAGTATCAGGAAGCAAATCCTGGAGTCTACACTATTGTCACCTTCCCTTTCCTATTTGCTGTAATGTTTGGTGATTGGGGCCATGGAATATGCTTGTTGCTGGCAACATTATATTTTATAATAAGGGAGAAGAAATTTTCCGGCCAGAAACTTGGAGATATCGTTGAAATGACTTTTGGGGGTCGTTATGTTATCATGATGATGGCACTTTTTTCGATCTACACAGGACTGATTTACAATGAATTCTTTTCTGTCCCATTTGAACTGTTTGGGCCTTCTGCATACGGTTGTCGTGATACTTCATGCAGGGATGCTACTTCCATTGGTTTAGTAAAGGTTCGTGATACATATCCATTTGGTGTGGATCCTAAGTGGCATGGCACGCGAAGTGAGTTACCTTTTCTCAACTCTTTGAAGATGAAGATGTCTATCCTACTGGGAGTAGCTCAAATGAATCTAGGAATTATACTGAGCTACTTCAATGCAAAATTCTTTGGAGAAAGCATTAACATCTGGTACCAATTTGTTCCCCAGATGATATTCTTGAACAGCTTATTTGGTTACCTCTCACTTCTCATAATTGTAAAGTGGTACTCTGGATCTCAAGCTGATCTGTATCACGTAATGATATATATGTTCTTGAGTCCGACTGATGATCTAGGTGAAAATCAGCTTTTCCCAGGACAGAAGTTCCTTCAGCTTCTGTTACTTCTGTCTGCCCTCACTGCCGTGCCATGGATGTTATTTCCCAAGCCTCTTCTTTTGAAGAAACAAAATGAAGAAAGGCACCAAGGACAATCCTACTCCGTACTTCACTGTACAGATGACAATCACGAAATAGAACCACACCACGGTTCCCACGGCCATGAGGAGTTCGATTTGAGTGAGGTTTTTGTACACCAACTTATACATACCATAGAATTTGTTCTTGGTGCAGTCTCGAACACAGCATCCTATCTTCGTCTATGGGCCCTCAGTCTAGCGCATTCGGAGTTGTCGAGTGTATTTTACGACAAGGTTCTACTCTTAGCTTGGGGGTTCAATAGTTTGATCATTCGAATAGTAGGAATGGCCGTTTTCATTTTTGCAACTGTGGGAGTTTTACTAATTATGGAAACACTAAGCGCATTCCTACACGCCTTGAGGCTCCACTGGGTGGAGTTTCAGAACAAATTCTATGCTGGAGATGGATTCAAATTTTCCCCTTTCTCCTTTTCGTTGCTTCGGGAGGAGGATGAGTGA 1575 41.71 MGQVHGSQLLQTIGHQYELWNLLVKKEKSVYHTLNMLSVDVTKKCLVGEGWCPVFATNQIQSVMQKATLDSKSQIEAIFHVLDTKEAPPTYFRTNKFTSSFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSGQKLGDIVEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDTSCRDATSIGLVKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNAKFFGESINIWYQFVPQMIFLNSLFGYLSLLIIVKWYSGSQADLYHVMIYMFLSPTDDLGENQLFPGQKFLQLLLLLSALTAVPWMLFPKPLLLKKQNEERHQGQSYSVLHCTDDNHEIEPHHGSHGHEEFDLSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNSLIIRIVGMAVFIFATVGVLLIMETLSAFLHALRLHWVEFQNKFYAGDGFKFSPFSFSLLREEDE 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27216754 27220964 + MELO3C010983.2.1 Cme03g01909 323920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01909 524 Pfam V-type ATPase 116kDa subunit family 5 516 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cme03g01909 524 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 524 - -
Cme03g01909 524 PANTHER VACUOLAR PROTON ATPASES 1 524 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01909 Cme-Chr3:27216754 Cme11g01758 Cme-Chr11:25750228 0 dispersed
Cme01g01362 Cme-Chr1:16991930 Cme03g01909 Cme-Chr3:27216754 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01909 K02154 - csv:101209817 1014.22