Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01914 ATGGCGGACACGGGCTCTGCCTCCGACAAGAGAATGTCGTGTTCTATCCCTGAGAGGTTCCAACTCCATGCTGCCATGTTGGCCTTGCAGTTCGGCTATGCCGGTTTCCATGTCGTCTCTAGAGCTGCCCTTAACATGGGCATTAGTAAACTCGTCTTTCCTGTTTACCGAAATGTCATCGCTTTGCTCCTCCTCCTTCCTTTTGCATATTTCATAGAAAAGAAGGATAGACCCGCCCTCACTCTCAACTTTGTCCTTCAGTTCTTCCTGCTAGCTCTCGTTGGAATTACAGCCAACCAAGGGTTTTACTTGCTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTTGTATTCAAAATTCTGTCCCTGCCATTACTTTCCTCATGGCTGCACTTCTCAGAATTGAGCAAGTACGACTGAACCGGAAAGATGGGATAGCAAAGGTGATGGGTACAATATGTTGCGTGGCCGGAGCGACGGTGATCACATTATACAAAGGGCCCACCATCTACAGCCCCGGAACAACGTCGACGGTGACGTTGCAGGATATGGCAGAGACGACATCGGTGATGACGACGCTGCAAGGGCCAGGAATGTTCCCGTCGCTAGGCGACGCAAAGGGGAAAAGCTGGACGTTAGGGTGCGTGTACTTGATCGGCCACTGCTTGTCGTGGTCGGCGTGGCTAGTCCTACAAGCACCGGTGCTGAAAAAATATCCGGCTCGCCTCTCCGTCACCTCCTTCACTTGCTTCTTTGGCCTCATCCAATTCCTCATCATCGCCGTCGCCTTCGAGCGCGACGCTCAGGCTTGGCTCTTTCACTCCGGCGCTGAAGCCTTTAGCATCGTTTATGCTGGGGTGGTGGCTTCGGGGATAGCATTTGCTGTACAGATATGGTGCATCGACAGAGGTGGCCCTGTCTTCGTTGCTGTCTACCAACCTGTTCAGACCTTCGTTGTTGCTCTCATGGCTTCCTTCGCTTTGGGCGAGGAGTTCTACTTGGGAGGGATCATAGGGGCGGTGCTTATTATAACGGGATTGTACCTTGTGCTGTGGGGAAAGAGCGAAGAAAAGAAGATCTTGTTGATCCATCAGACCGCACCGGACCACGGTAGCAGCAGAATAAGTGGCCAGATCAAACCGTCCATCACCCAGCCTCTACTCCATCCTACGGCTGAAAATGTTTGA 1188 51.94 MADTGSASDKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFIEKKDRPALTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASCIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPGTTSTVTLQDMAETTSVMTTLQGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFLIIAVAFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIITGLYLVLWGKSEEKKILLIHQTAPDHGSSRISGQIKPSITQPLLHPTAENV 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27258768 27263105 + MELO3C010979.2.1 Cme03g01914 323925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01914 395 PANTHER WAT1-RELATED PROTEIN 14 366 IPR030184 GO:0016021|GO:0022857
Cme03g01914 395 PANTHER WAT1-RELATED PROTEIN 14 366 - -
Cme03g01914 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 355 - -
Cme03g01914 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Cme03g01914 395 Pfam EamA-like transporter family 213 351 IPR000620 GO:0016020|GO:0016021
Cme03g01914 395 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme03g01914 Cme04g00502 CCT
Cme03g01914 Cme04g00502 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01914 Cme-Chr3:27258768 Cme04g02125 Cme-Chr4:28571020 1.94E-78 dispersed
Cme09g00341 Cme-Chr9:2908395 Cme03g01914 Cme-Chr3:27258768 1.15E-49 dispersed
Cme02g01709 Cme-Chr2:24145488 Cme03g01914 Cme-Chr3:27258768 1.09E-140 transposed
Cme05g00553 Cme-Chr5:5374809 Cme03g01914 Cme-Chr3:27258768 3.10E-75 transposed
Cme05g00769 Cme-Chr5:9386611 Cme03g01914 Cme-Chr3:27258768 1.94E-73 transposed
Cme07g00805 Cme-Chr7:7598776 Cme03g01914 Cme-Chr3:27258768 8.15E-73 transposed
Cme08g01728 Cme-Chr8:19777257 Cme03g01914 Cme-Chr3:27258768 1.68E-32 transposed
Cme12g01119 Cme-Chr12:19149808 Cme03g01914 Cme-Chr3:27258768 3.06E-42 transposed
Cme03g01914 Cme-Chr3:27258768 Cme04g00502 Cme-Chr4:4070978 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01914 - - csv:101210562 750.355