Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme03g01934 | ATGTCCTCCCTCTGCTTCTGGTGCTCTGCGGCCGCGGCCACGGCCACCGCTGTTGCTCTCTGGATCGTTGTCGTTTTCCATTTTTTGTTGAAGAATAAGTCGCCGTCTTCGCGGATTTCTCCTGCTGGTACTCCTCCTGGAAGCAGAGGATTGCCTTTCATTGGAGAGACGCTGCAGTTCATGGCTGCCGTTAACTGTAGCAGCGGCGTTTATGATTTCGTCAGAATCCGCTGCCTCCGGTATGGAGGATGTTTTAAGACTCGAATATTTGGGGAAACACATGTGTTTGTATCAAGCACAGAATGGGCGAAGCTTATACTGAACGATGGAGGAGGAAGGTTCACTAAAAAGTACATAAAGTCCATTGCTGAGTTAGTCGGCCATCAAAGTTTGCTCTGTGCTCCACATTTACACCACAAATTCTTACGAAGTCGTCTCATCAATCTCTTCTCTTCTTGCTTTTTGGCCTCTTTCGTTCCTCAATTCGATCGACAAATTGTCGAGACGTTTCAAAGATGGGAGAGTGGTTCCACCATTTTCGTCCTCACCGAAGCCCTCAAGATAACATGCAAAGCGATGTGTAAGATGTTAATAAGCTTAGAGGAGGAAAACGAAGTAGAGACGATACAAAAAGATGTTGCATATATTTGTGCAGCTATGCTCGCATTCCCATGGCGATTTCCATGGACAAGATTCGACACAGGTCTTAAGGCAAGACGAAGAATCATAAAGAAACTCAAAAGCATAATTCAGGAGAGACGAGAATTAGAGCTCCAATATGAAGATTTCCTACAACAATTGCTGATGGAAGAGGACAATGAAAGACCACTATCAGATATGGAGATTGGAGATAATATATTGACGATGTTGATTGCTGGACAAGATACAACAGCGAGTGCTATCACTTGGATAGTGAAATTCTTAGATGAGAACCAAGACGTGCTTCAAAATCTAAAGGAAGAACAATTTAAAATATTGGAGAAACAACGAGAAGAGAATCGAAATTTCCTTACATCGGAAGATCTTGCCAACATGTCCTATGCTGCCAAGATAGTAAAAGAATCCTTGAGGTTAGCATCTATTGTTCCATGGTTGCCGAGGCTAATCCTTCACGACACTGAAATTCAAGATTACAAAATCAAGAAAGGTTGGAATGTTAACATTGATGTGAGATCACTGCACTCAGATCCTTCTATTTACAAAGATCCAATTAAGTTTGATCCATCCAGGTTTGATGAAGAAACAAAGGCATTTGGCTTTCTAGCCTTTGGGATGGGAGGGAGGCAGTGCCTAGGTATGAACCTAGCCAAAGCCATGATGCTCGTCTTTCTTCACCGCTTGGTTACTTCTTTCAGATGGAAAGTAATGGACTGCGACTCCAGCATTGAAAAGTGGGCGCTTTTCACCAAATTAAAGAGCGGTTGTCCAATTCTCATCACGCCTATTCAATCTTAA | 1455 | 42.96 | MSSLCFWCSAAAATATAVALWIVVVFHFLLKNKSPSSRISPAGTPPGSRGLPFIGETLQFMAAVNCSSGVYDFVRIRCLRYGGCFKTRIFGETHVFVSSTEWAKLILNDGGGRFTKKYIKSIAELVGHQSLLCAPHLHHKFLRSRLINLFSSCFLASFVPQFDRQIVETFQRWESGSTIFVLTEALKITCKAMCKMLISLEEENEVETIQKDVAYICAAMLAFPWRFPWTRFDTGLKARRRIIKKLKSIIQERRELELQYEDFLQQLLMEEDNERPLSDMEIGDNILTMLIAGQDTTASAITWIVKFLDENQDVLQNLKEEQFKILEKQREENRNFLTSEDLANMSYAAKIVKESLRLASIVPWLPRLILHDTEIQDYKIKKGWNVNIDVRSLHSDPSIYKDPIKFDPSRFDEETKAFGFLAFGMGGRQCLGMNLAKAMMLVFLHRLVTSFRWKVMDCDSSIEKWALFTKLKSGCPILITPIQS | 484 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 27387176 | 27390541 | + | MELO3C010961.2.1 | Cme03g01934 | 323945 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme03g01934 | 484 | Pfam | Cytochrome P450 | 45 | 457 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | P450 superfamily signature | 292 | 309 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | P450 superfamily signature | 350 | 361 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | P450 superfamily signature | 421 | 430 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | P450 superfamily signature | 430 | 441 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | E-class P450 group I signature | 281 | 298 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | E-class P450 group I signature | 301 | 327 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | E-class P450 group I signature | 349 | 367 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | E-class P450 group I signature | 389 | 413 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | E-class P450 group I signature | 420 | 430 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PRINTS | E-class P450 group I signature | 430 | 453 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PANTHER | CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 | 22 | 480 | - | - | |
Cme03g01934 | 484 | Gene3D | Cytochrome P450 | 35 | 480 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01934 | 484 | PANTHER | CYTOCHROME P450 26 | 22 | 480 | - | - | |
Cme03g01934 | 484 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 423 | 432 | IPR017972 | GO:0005506|GO:0016705 | |
Cme03g01934 | 484 | Coils | Coil | 239 | 273 | - | - | |
Cme03g01934 | 484 | SUPERFAMILY | Cytochrome P450 | 39 | 481 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g00680 | Cme-Chr1:6136516 | Cme03g01934 | Cme-Chr3:27387176 | 2.88E-72 | dispersed | |
Cme03g01934 | Cme-Chr3:27387176 | Cme07g00357 | Cme-Chr7:2295995 | 3.79E-72 | dispersed | |
Cme03g01934 | Cme-Chr3:27387176 | Cme08g00877 | Cme-Chr8:5777745 | 7.19E-142 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme03g01934 | - | - | csv:101215324 | 892.493 |