Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01975 TCCTCGTCGTCTTCTTCTTTATTTTCCTTTTCCCACTCTCAAATTTCTCCATTTCTTCTTCCCTCTACTTTTAACACCCAAACACCACACTCTCCCCGGAATATGACCTCCGACGGCGCCACTTCTGCCTCCAATTGTCGCCGGAAGCCTTCTTGGAGGGAGCGGGAGAATAATCGGACTAGAGAGCGTCGGAGAAGAGCCATCGCGGCTAAGATTTACTCCGGCCTTAGAGCTCAGGGTAACTTCAATTTGCCTAAACATTGTGACAATAACGAGGTCCTTAAAGCCCTCTGTGCTGAAGCTGGTTGGACTGTCGAAGATGACGGAACCACTTATAGGAAGGGATGCAAGCCACCCCCGATTGATATTGTTGGCACTTCAACCAAAATCACCCCTTATTCTTCCCAAAATCCAAGTCCATTGTCTTCTTCTTTCGCCAGTCCTATGGGATCTTACCAAGTAAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTTACGATGGCAACAATCCGTCGAATCTCATTCCTTATCTTCGCCAAGCGATTCCCATTTCACTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTGACCCCTCCCCTTTCATCCCCAGCCTCAAGGACTCCACAGCCATTCCCCAATTGGGAAGTCAATGCTAAAGAATCCTTCTCCTCCTTGAATTATCCTTTCTTTGCAGTGTCTGCTCCAGCTAGTCCGACCCGCCCTCAGCTCCATACTCCCGCCCCGATCCACAAATGTGACGAATCTGAATCATCTACCAATGATTCCAATCAATGGGCACTTCTCCGTGCCTATGCGCCTTCTGCATCGACAATGCCAACATCTCCCACTTTCAACCTTGTGAAACCTGCTGACCAGCACGTTCTGCATGGTGGTTTCATCAAAGAAAATGGAAGAGGAAACGAATTCGAGTTCTTGGGCTACAAGGTTAAGCCTTGGGAAGGGGAGAAAATCCACGACGTTGGATTGGAGGATTTAGAGCTCACACTTGGTAGCAGTAAGGCTCGAAGCTAA 1038 49.23 SSSSSSLFSFSHSQISPFLLPSTFNTQTPHSPRNMTSDGATSASNCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEDDGTTYRKGCKPPPIDIVGTSTKITPYSSQNPSPLSSSFASPMGSYQVSPSSSSFPSPSRYDGNNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFPNWEVNAKESFSSLNYPFFAVSAPASPTRPQLHTPAPIHKCDESESSTNDSNQWALLRAYAPSASTMPTSPTFNLVKPADQHVLHGGFIKENGRGNEFEFLGYKVKPWEGEKIHDVGLEDLELTLGSSKARS 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27612904 27614287 - MELO3C010925.2.1 Cme03g01975 323986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01975 345 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 35 344 - -
Cme03g01975 345 MobiDBLite consensus disorder prediction 48 63 - -
Cme03g01975 345 MobiDBLite consensus disorder prediction 240 260 - -
Cme03g01975 345 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 35 344 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cme03g01975 345 MobiDBLite consensus disorder prediction 130 167 - -
Cme03g01975 345 Pfam BES1/BZR1 plant transcription factor, N-terminal 47 169 IPR008540 -
Cme03g01975 345 MobiDBLite consensus disorder prediction 19 47 - -
Cme03g01975 345 MobiDBLite consensus disorder prediction 19 63 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g01975 Cme-Chr3:27612904 Cme11g02155 Cme-Chr11:28978200 6.83E-15 dispersed
Cme07g01358 Cme-Chr7:19092023 Cme03g01975 Cme-Chr3:27612904 1.89E-47 transposed
Cme12g01261 Cme-Chr12:20706393 Cme03g01975 Cme-Chr3:27612904 1.05E-47 transposed
Cme03g01975 Cme-Chr3:27612904 Cme08g00821 Cme-Chr8:5434941 3.93E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41084 PF05687 BES1_N 8.70E-62 No_clan Cme TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01975 K14503 - csv:101219853 555.058