Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g01990 ATGTCCTCCATTGTCATTCCTTCTCTTCAACCTCACTTGCGATTCCCATCCTCGCAAGAAACGCCTCAAAGATCTCGTTCTAGAGTTGGCTTCGTTTCCATACGTCCAATCTACGCCACCGACGGAGTTTCTTCCTCGTCTTCTTCCTCTCTTCAAGTGCCGCAGCGGATTGTTTCGCCGCCGGAACCCACCAAGCTTCCTTTGAGGAAGGTTCCCGGTGATTATGGGCCACCGATGTTTGGGGCGTTGAAGGACAGACATGATTATTTTTATAATCAGGGGAGGGAAGAGTATTTGAAATCTCGAATGCTCCGGTATGAATCCACTGTGTATAGAACTAATATGCCGCCGGGTCCATTTATCACTTCCGATTCCCGAGTTGTTGTTTTACTCGACGGGAAGAGTTTTCCTGTTCTTTTCGACCATTCTAAAGTTGAGAAGAAAGATCTCTTTACCGGAACTTACATGCCTGTAACAGAGCTCACCGGCGGTTACAGGGTGCTTTCTTATATTGACCCATCTGAGCCCGATCACGCTAAGCTTAAACAGTTGATTTTCTTTCTCCTCAAGCACCGCCGGGATAAAATTATGCCGGAATTTCACTCTACTTTTTCTGAGCTATTCGAGACTCTGGAAAAGGATTTGGCTGCTGCTGGTAGAGCAGAGTACAATGCTTCCGGTGAACAAGCGGCGTTTAATTTCTTGGCTCGGTCTCTTTTCGGCGCTGATCCGGTAGATTCCAAATTGGGTCGCGATGCGCCGAAATTGATCGCGAAATGGGTCTTATTCCAGCTTGGCCCTGTTCTGAGTCTCGGCCTCCCCAAGGTCGTCGAGGAGCTTCTCCTCCGCACGGTCCGGCTCCCCCCGGCGTTGATTAAAGCCGATTACCGTCGGTTGTACGACTTCTTTTACAAGTCGTCGGAGGCGGTGTTTGAGGAGGCGGATAGATTGGGAATTTCGAGGGAAGAAGCTTGTCACAACTTGCTATTCACAACTTGTTTTAATTCATTTGGAGGGATGAAGATCTTTTTCCCCAATATGATAAAATGGATCGGCCGAGCCGGAGTGAATCTCCACACCCGACTAGCACGGGAGATTCGTACTGCCGTAAAAGCCAACGGCGGGAAAATCACGATGGGGGCTATGGAACAGATGCCGCTGATGAAATCAGTGGTGTACGAAGCGTTAAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCAAAGAAAGACCTTGTGGTGGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGAGAAGTGATTTGTGGGTATCAGCCATTCGCAACAAGAGATCCGAAAATCTTCGACAGAGCGGACGAGTTCGTACCTGATCGGTTCACGGGCGAGGGTGAGGAGCTTCTCAAACACGTCATATGGTCAAACGGACCGGAAACACAGTCGCCGTCGGTTCAGAACAAGCAGTGCGCAGGAAAAGACTTCATCGTCTTCATCTCTCGGCTTCTCGTCGTTGAACTTTTCCTCCGTTACGACTCCTTCGACATCGAAGCCTCAAACACTCCGTTAGGTGCCGCCGTCACCGTAACCTCCCTAAAGAAAGCAAGTTTCTAA 1596 49.81 MSSIVIPSLQPHLRFPSSQETPQRSRSRVGFVSIRPIYATDGVSSSSSSSLQVPQRIVSPPEPTKLPLRKVPGDYGPPMFGALKDRHDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFITSDSRVVVLLDGKSFPVLFDHSKVEKKDLFTGTYMPVTELTGGYRVLSYIDPSEPDHAKLKQLIFFLLKHRRDKIMPEFHSTFSELFETLEKDLAAAGRAEYNASGEQAAFNFLARSLFGADPVDSKLGRDAPKLIAKWVLFQLGPVLSLGLPKVVEELLLRTVRLPPALIKADYRRLYDFFYKSSEAVFEEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGVNLHTRLAREIRTAVKANGGKITMGAMEQMPLMKSVVYEALRIEPPVPVQYGRAKKDLVVESHDAAFEIKEGEVICGYQPFATRDPKIFDRADEFVPDRFTGEGEELLKHVIWSNGPETQSPSVQNKQCAGKDFIVFISRLLVVELFLRYDSFDIEASNTPLGAAVTVTSLKKASF 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27686708 27688628 + MELO3C010910.2.1 Cme03g01990 324001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g01990 531 Gene3D Cytochrome P450 62 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01990 531 MobiDBLite consensus disorder prediction 41 71 - -
Cme03g01990 531 PRINTS E-class P450 group IV signature 385 401 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01990 531 PRINTS E-class P450 group IV signature 438 456 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01990 531 PRINTS E-class P450 group IV signature 484 502 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01990 531 Pfam Cytochrome P450 360 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g01990 531 PANTHER CYTOCHROME P450 26 52 528 - -
Cme03g01990 531 MobiDBLite consensus disorder prediction 41 57 - -
Cme03g01990 531 PANTHER ALLENE OXIDE SYNTHASE, CHLOROPLASTIC 52 528 - -
Cme03g01990 531 SUPERFAMILY Cytochrome P450 66 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme01g00009 Cme-Chr1:78963 Cme03g01990 Cme-Chr3:27686708 5.53E-179 dispersed
Cme01g00010 Cme-Chr1:82985 Cme03g01990 Cme-Chr3:27686708 0 dispersed
Cme01g00442 Cme-Chr1:3195366 Cme03g01990 Cme-Chr3:27686708 1.19E-128 dispersed
Cme03g01990 Cme-Chr3:27686708 Cme12g01649 Cme-Chr12:23585241 1.27E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g01990 K01723 - csv:101221732 1026.93