Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme03g01990 | ATGTCCTCCATTGTCATTCCTTCTCTTCAACCTCACTTGCGATTCCCATCCTCGCAAGAAACGCCTCAAAGATCTCGTTCTAGAGTTGGCTTCGTTTCCATACGTCCAATCTACGCCACCGACGGAGTTTCTTCCTCGTCTTCTTCCTCTCTTCAAGTGCCGCAGCGGATTGTTTCGCCGCCGGAACCCACCAAGCTTCCTTTGAGGAAGGTTCCCGGTGATTATGGGCCACCGATGTTTGGGGCGTTGAAGGACAGACATGATTATTTTTATAATCAGGGGAGGGAAGAGTATTTGAAATCTCGAATGCTCCGGTATGAATCCACTGTGTATAGAACTAATATGCCGCCGGGTCCATTTATCACTTCCGATTCCCGAGTTGTTGTTTTACTCGACGGGAAGAGTTTTCCTGTTCTTTTCGACCATTCTAAAGTTGAGAAGAAAGATCTCTTTACCGGAACTTACATGCCTGTAACAGAGCTCACCGGCGGTTACAGGGTGCTTTCTTATATTGACCCATCTGAGCCCGATCACGCTAAGCTTAAACAGTTGATTTTCTTTCTCCTCAAGCACCGCCGGGATAAAATTATGCCGGAATTTCACTCTACTTTTTCTGAGCTATTCGAGACTCTGGAAAAGGATTTGGCTGCTGCTGGTAGAGCAGAGTACAATGCTTCCGGTGAACAAGCGGCGTTTAATTTCTTGGCTCGGTCTCTTTTCGGCGCTGATCCGGTAGATTCCAAATTGGGTCGCGATGCGCCGAAATTGATCGCGAAATGGGTCTTATTCCAGCTTGGCCCTGTTCTGAGTCTCGGCCTCCCCAAGGTCGTCGAGGAGCTTCTCCTCCGCACGGTCCGGCTCCCCCCGGCGTTGATTAAAGCCGATTACCGTCGGTTGTACGACTTCTTTTACAAGTCGTCGGAGGCGGTGTTTGAGGAGGCGGATAGATTGGGAATTTCGAGGGAAGAAGCTTGTCACAACTTGCTATTCACAACTTGTTTTAATTCATTTGGAGGGATGAAGATCTTTTTCCCCAATATGATAAAATGGATCGGCCGAGCCGGAGTGAATCTCCACACCCGACTAGCACGGGAGATTCGTACTGCCGTAAAAGCCAACGGCGGGAAAATCACGATGGGGGCTATGGAACAGATGCCGCTGATGAAATCAGTGGTGTACGAAGCGTTAAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCAAAGAAAGACCTTGTGGTGGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGAGAAGTGATTTGTGGGTATCAGCCATTCGCAACAAGAGATCCGAAAATCTTCGACAGAGCGGACGAGTTCGTACCTGATCGGTTCACGGGCGAGGGTGAGGAGCTTCTCAAACACGTCATATGGTCAAACGGACCGGAAACACAGTCGCCGTCGGTTCAGAACAAGCAGTGCGCAGGAAAAGACTTCATCGTCTTCATCTCTCGGCTTCTCGTCGTTGAACTTTTCCTCCGTTACGACTCCTTCGACATCGAAGCCTCAAACACTCCGTTAGGTGCCGCCGTCACCGTAACCTCCCTAAAGAAAGCAAGTTTCTAA | 1596 | 49.81 | MSSIVIPSLQPHLRFPSSQETPQRSRSRVGFVSIRPIYATDGVSSSSSSSLQVPQRIVSPPEPTKLPLRKVPGDYGPPMFGALKDRHDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFITSDSRVVVLLDGKSFPVLFDHSKVEKKDLFTGTYMPVTELTGGYRVLSYIDPSEPDHAKLKQLIFFLLKHRRDKIMPEFHSTFSELFETLEKDLAAAGRAEYNASGEQAAFNFLARSLFGADPVDSKLGRDAPKLIAKWVLFQLGPVLSLGLPKVVEELLLRTVRLPPALIKADYRRLYDFFYKSSEAVFEEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGVNLHTRLAREIRTAVKANGGKITMGAMEQMPLMKSVVYEALRIEPPVPVQYGRAKKDLVVESHDAAFEIKEGEVICGYQPFATRDPKIFDRADEFVPDRFTGEGEELLKHVIWSNGPETQSPSVQNKQCAGKDFIVFISRLLVVELFLRYDSFDIEASNTPLGAAVTVTSLKKASF | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 27686708 | 27688628 | + | MELO3C010910.2.1 | Cme03g01990 | 324001 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme03g01990 | 531 | Gene3D | Cytochrome P450 | 62 | 531 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01990 | 531 | MobiDBLite | consensus disorder prediction | 41 | 71 | - | - | |
Cme03g01990 | 531 | PRINTS | E-class P450 group IV signature | 385 | 401 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01990 | 531 | PRINTS | E-class P450 group IV signature | 438 | 456 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01990 | 531 | PRINTS | E-class P450 group IV signature | 484 | 502 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01990 | 531 | Pfam | Cytochrome P450 | 360 | 460 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g01990 | 531 | PANTHER | CYTOCHROME P450 26 | 52 | 528 | - | - | |
Cme03g01990 | 531 | MobiDBLite | consensus disorder prediction | 41 | 57 | - | - | |
Cme03g01990 | 531 | PANTHER | ALLENE OXIDE SYNTHASE, CHLOROPLASTIC | 52 | 528 | - | - | |
Cme03g01990 | 531 | SUPERFAMILY | Cytochrome P450 | 66 | 506 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme01g00009 | Cme-Chr1:78963 | Cme03g01990 | Cme-Chr3:27686708 | 5.53E-179 | dispersed | |
Cme01g00010 | Cme-Chr1:82985 | Cme03g01990 | Cme-Chr3:27686708 | 0 | dispersed | |
Cme01g00442 | Cme-Chr1:3195366 | Cme03g01990 | Cme-Chr3:27686708 | 1.19E-128 | dispersed | |
Cme03g01990 | Cme-Chr3:27686708 | Cme12g01649 | Cme-Chr12:23585241 | 1.27E-08 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme03g01990 | K01723 | - | csv:101221732 | 1026.93 |