Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme03g02046 | ATGGGTTGGCCTTTAATCGGGGAAACCTTTCATTTCTATTCTCAACATCCAACCTCCTTTTTCCTTGGAAAGCAAAAAAGATATGGAGAGATATTCAAGACCCACATTCATGGGTGTCCGTGTGTGATGTTAGCGACGCCCGAGGCGGCTCGGTTCGTGCTAGTCACACAAGCTCATCTCTTTAAACCTACATATCCACAAAGCAAAGAGCGATTAATTGGACCATCGGCTCTGTTTTTCCACCAAAGTGAGACCCATTTGCGGCTGCGTAAGCTTATACAAAGCTCCCTCTCACCGGACCCTGTTCGAGCCTTGGTCCCTCACATCCACGCCTTAGCCATCTCTGCATTGCCTTCATCGCTTAGTGGTCATGTCATTGACACTTACCATCAAATGAAGAAGTTCTCTTTTGAAGTCGGAATTTTGGCAATTTTCGGACATTTGGAAGACACCAACTACAGAGAAGAACTAAGGACAAACTATTCCATAGTGAACAAAGGCTATAATTCTTTCCCCACCAACATTCCGGGAACGCTTTACAAAAAAGCAATTAAAGCAAGAAAAAGGCTGGAAGAGATCATAAGCTGTATAATATTAGAGAAAAAGGAGAAGAGATCAAAGGTATTAGGAGAGAAGAATCTATTGTCATGTTTGGTAAAATGGAGAGATGAAAAAGGAGAAAGTTTAAGTGATGAACAGATCGCCGACAACATTATCGGAGTTCTGTTTGCGGCTCAGGACACAACGGCCAGTGTTCTCACTTGGGTTGTTAAATATCTACATGATAACCCCAAAGTTCTTGAAGCTGTCAAGGTGGAACAAAAGGTAATTGAAGAAGACATTAATGAGGGGAGCCGACCAATGAGATGGTCTCACACACGAAACATGCCCTTTACCAATAAGGTGGTGTTGGAGAGCTTGAGAATGGCTAGTATTATATCATTCACTTTTAGAGAAGCTGTGGCTGATGTTGAATATAAAGGTTATTTAATACCAAAAGGTTGGAAAGTAATGCCTTTTGTTCAGGAATATTCATCACAATCCTGA | 1047 | 41.83 | MGWPLIGETFHFYSQHPTSFFLGKQKRYGEIFKTHIHGCPCVMLATPEAARFVLVTQAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRALVPHIHALAISALPSSLSGHVIDTYHQMKKFSFEVGILAIFGHLEDTNYREELRTNYSIVNKGYNSFPTNIPGTLYKKAIKARKRLEEIISCIILEKKEKRSKVLGEKNLLSCLVKWRDEKGESLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNPKVLEAVKVEQKVIEEDINEGSRPMRWSHTRNMPFTNKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPFVQEYSSQS | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 27961732 | 27965831 | - | MELO3C010858.2.1 | Cme03g02046 | 324057 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme03g02046 | 348 | PRINTS | E-class P450 group IV signature | 296 | 312 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g02046 | 348 | PRINTS | E-class P450 group IV signature | 235 | 261 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g02046 | 348 | PRINTS | E-class P450 group IV signature | 19 | 42 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g02046 | 348 | SUPERFAMILY | Cytochrome P450 | 2 | 341 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g02046 | 348 | PANTHER | CYTOCHROME P450 26 | 1 | 341 | - | - | |
Cme03g02046 | 348 | Gene3D | Cytochrome P450 | 1 | 345 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g02046 | 348 | Pfam | Cytochrome P450 | 3 | 342 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme03g02046 | 348 | PANTHER | CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE | 1 | 341 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme03g02046 | Cme-Chr3:27961732 | Cme07g01477 | Cme-Chr7:20551212 | 6.54E-127 | dispersed | |
Cme01g00047 | Cme-Chr1:374836 | Cme03g02046 | Cme-Chr3:27961732 | 1.19E-156 | wgd | |
Cme03g02046 | Cme-Chr3:27961732 | Cme07g00357 | Cme-Chr7:2295995 | 8.83E-166 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme03g02046 | K09843 | - | vvi:100245540 | 493.426 |