Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g02046 ATGGGTTGGCCTTTAATCGGGGAAACCTTTCATTTCTATTCTCAACATCCAACCTCCTTTTTCCTTGGAAAGCAAAAAAGATATGGAGAGATATTCAAGACCCACATTCATGGGTGTCCGTGTGTGATGTTAGCGACGCCCGAGGCGGCTCGGTTCGTGCTAGTCACACAAGCTCATCTCTTTAAACCTACATATCCACAAAGCAAAGAGCGATTAATTGGACCATCGGCTCTGTTTTTCCACCAAAGTGAGACCCATTTGCGGCTGCGTAAGCTTATACAAAGCTCCCTCTCACCGGACCCTGTTCGAGCCTTGGTCCCTCACATCCACGCCTTAGCCATCTCTGCATTGCCTTCATCGCTTAGTGGTCATGTCATTGACACTTACCATCAAATGAAGAAGTTCTCTTTTGAAGTCGGAATTTTGGCAATTTTCGGACATTTGGAAGACACCAACTACAGAGAAGAACTAAGGACAAACTATTCCATAGTGAACAAAGGCTATAATTCTTTCCCCACCAACATTCCGGGAACGCTTTACAAAAAAGCAATTAAAGCAAGAAAAAGGCTGGAAGAGATCATAAGCTGTATAATATTAGAGAAAAAGGAGAAGAGATCAAAGGTATTAGGAGAGAAGAATCTATTGTCATGTTTGGTAAAATGGAGAGATGAAAAAGGAGAAAGTTTAAGTGATGAACAGATCGCCGACAACATTATCGGAGTTCTGTTTGCGGCTCAGGACACAACGGCCAGTGTTCTCACTTGGGTTGTTAAATATCTACATGATAACCCCAAAGTTCTTGAAGCTGTCAAGGTGGAACAAAAGGTAATTGAAGAAGACATTAATGAGGGGAGCCGACCAATGAGATGGTCTCACACACGAAACATGCCCTTTACCAATAAGGTGGTGTTGGAGAGCTTGAGAATGGCTAGTATTATATCATTCACTTTTAGAGAAGCTGTGGCTGATGTTGAATATAAAGGTTATTTAATACCAAAAGGTTGGAAAGTAATGCCTTTTGTTCAGGAATATTCATCACAATCCTGA 1047 41.83 MGWPLIGETFHFYSQHPTSFFLGKQKRYGEIFKTHIHGCPCVMLATPEAARFVLVTQAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRALVPHIHALAISALPSSLSGHVIDTYHQMKKFSFEVGILAIFGHLEDTNYREELRTNYSIVNKGYNSFPTNIPGTLYKKAIKARKRLEEIISCIILEKKEKRSKVLGEKNLLSCLVKWRDEKGESLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNPKVLEAVKVEQKVIEEDINEGSRPMRWSHTRNMPFTNKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPFVQEYSSQS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27961732 27965831 - MELO3C010858.2.1 Cme03g02046 324057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g02046 348 PRINTS E-class P450 group IV signature 296 312 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g02046 348 PRINTS E-class P450 group IV signature 235 261 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g02046 348 PRINTS E-class P450 group IV signature 19 42 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g02046 348 SUPERFAMILY Cytochrome P450 2 341 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g02046 348 PANTHER CYTOCHROME P450 26 1 341 - -
Cme03g02046 348 Gene3D Cytochrome P450 1 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g02046 348 Pfam Cytochrome P450 3 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme03g02046 348 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 1 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02046 Cme-Chr3:27961732 Cme07g01477 Cme-Chr7:20551212 6.54E-127 dispersed
Cme01g00047 Cme-Chr1:374836 Cme03g02046 Cme-Chr3:27961732 1.19E-156 wgd
Cme03g02046 Cme-Chr3:27961732 Cme07g00357 Cme-Chr7:2295995 8.83E-166 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g02046 K09843 - vvi:100245540 493.426