Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g02058 ATGGCTGATCAGGTTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGTTTTCGTGCCTGTGATGATGGCTTTAGGAATCCTGCACTCTATCAGAGACGTGCACCAATCACCAATTATTCCAATGGTGCTTTTCAATACCCTGCAGTGCAATCCTCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCTCGTACCCGATTGGCAAATGACGCCAAAGCTGCCAAGAAGGGTGGAGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACGTTGCAGTCTGATGGTATTGCTGGTCTATATCGTGGGTTTAACATTTCTTGCGTTGGTATCATCGTGTACCGTGGTTTATACTTTGGAATGTACGATTCTCTGAAGCCTGTTTTGTTGACCGGGAAGATGCAGGATAGTTTCTTCGCAAGCTTTGCCCTCGGTTGGCTCATCACCAACGGTGCTGGTCTTGCATCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACGTCTGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTACGATAAGTTGCAGGTGATCGTCTTCGGGAAGAAATACGGATCTGGTGGCGCTTAA 747 47.93 MADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRAPITNYSNGAFQYPAVQSSGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28068958 28070341 + MELO3C010845.2.1 Cme03g02058 324069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g02058 248 Pfam Mitochondrial carrier protein 62 146 IPR018108 -
Cme03g02058 248 Pfam Mitochondrial carrier protein 151 237 IPR018108 -
Cme03g02058 248 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 62 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme03g02058 248 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 62 248 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme03g02058 248 Gene3D Mitochondrial carrier domain 41 244 IPR023395 -
Cme03g02058 248 ProSiteProfiles Solute carrier (Solcar) repeat profile. 151 237 IPR018108 -
Cme03g02058 248 ProSiteProfiles Solute carrier (Solcar) repeat profile. 51 143 IPR018108 -
Cme03g02058 248 SUPERFAMILY Mitochondrial carrier 62 233 IPR023395 -
Cme03g02058 248 PRINTS Adenine nucleotide translocator signature 156 172 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme03g02058 248 PRINTS Adenine nucleotide translocator signature 101 114 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cme03g02058 248 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 62 - -
Cme03g02058 248 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 62 248 - -
Cme03g02058 248 PRINTS Mitochondrial carrier protein signature 160 182 IPR002067 GO:0055085
Cme03g02058 248 PRINTS Mitochondrial carrier protein signature 116 134 IPR002067 GO:0055085
Cme03g02058 248 PRINTS Mitochondrial carrier protein signature 66 84 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02058 Cme-Chr3:28068958 Cme12g01918 Cme-Chr12:25227726 3.10E-75 dispersed
Cme03g02058 Cme-Chr3:28068958 Cme03g02060 Cme-Chr3:28073563 2.25E-44 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g02058 K05863 - csv:101203484 356.295