Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g02092 ATGAAAACTTGCAGAGTTTCACAATGGTTTCTTCTGTTCTTGATTTCATTCAGTTCATGTTCATTTACAGAAGCTCAAAAGAGCAATCAGCAGTTGAAGAAGAAGACTTACATAATTCACATGGACAAAACAAGTATGCCACAAGCCTTTGATGATCATTTCCAATGGTATGATACTTCTTTGAAATCAGTTTCTGATTCTGCCCAAATGCTTTATTCCTACAACAACGTGATTCATGGCTTCTCCACAAGTTTGACTGTGGAGGAGGCTAAGTTAATGGAAAAACAAGAGGGAATTATTGCTGTCATGCCTGAAATGAAGTACGAGCTTCATACCACTCGCACACCTGAGTTTCTTGGACTTGGGAAGAGTGCTTCTTTCTTCCCGGCGTCCGCAAAGGTCAGCGAAGTCATCATCGGAATTCTCGACACCGGTGTATGGCCTGAATTGGAGAGTTTCAGTGATGATGGGCTTGGACCAATACCTGCAAGTTGGAAAGGGGAGTGTGAAGTAGGTAAAAACTTCAATTCATCTAGTTGTAACAGGAAATTGATTGGAGCAAGGTACTTTTCCAAGGGCTATGAAGCAGCATTTGGGCCGATTGATGAGTCCCAGGAGTCGAAATCACCGAGGGACGACGATGGCCACGGTTCTCACACATCAACAACTGCTGCAGGATCCGCCGTTACAGGTGCCAACCTCTTTGGTTTTGCTGCCGGGACTGCAAGAGGAATGGCGGCTGAAGCTCGAGTTGCAACGTATAAGGTATGTTGGCTTGGAGGGTGTTTCAGCAGTGACATTTTAGCTGCAATAGACAAGTCTGTTGAGGATGGTTGCAATATTGTATCCATGTCGCTTGGCGGAAACAGCGCAGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCAGCTCAGGGAGTTTTTGTGTCGTGTTCTGCCGGAAATGGTGGCCCATCATCGAGTACCTTGTCCAATGTAGCGCCATGGATAACCACCGTTGGCGCCGGGACGCTGGACAGGGACTTCCCAGCATATGTTACTCTCGGAAATGGGAAGAAGATAACAGGGGAATCGCTCTACAGTGGAAAGCCTTTGCCGAATTCTTTACTACCAATTGTATCTGCAGCCAGTGCGAGTAATTCATCCAGCGGTAGTCTTTGCTTGAGCGGTACTCTGAATCCGGCGAAGGTCGCGGGAAAGATAGTCGTTTGTGACCGAGGAGGGAACTCTCGAGTTCAAAAAGGGTTGGTGGTAAAAGAAGCCGGTGGTTTAGGGATGATTCTAGCTAACACTGAAGCATATGGGGAAGAACAATTAGCCGATGCACATCTCATACCCACGGCGGCCGTCGGCCAAGAAGCCGGCGACGCAATAAAGAGCTACATCTCCTCTGATTCAAACCCAACAGCAACAATCAGCACCGGCACCACAAGATTAGGAGTTCAACCGTCGCCGGTGGTGGCCGCATTCAGTTCTCGTGGCCCTAATCTCCTCACTCCACAGATTCTCAAACCCGATCTGATAGCACCGGGTGTGAACATTCTGGCTGGATGGACCGGCGGCGCTGGACCAACTGGTTTAGACAGCGATAAGCGGCACGTGGCCTTCAACATCATCTCTGGGACATCAATGTCTTGTCCTCACATCAGTGGATTAGCCGCTCTTCTTAAAGCCGCTCATCCAGATTGGAGCCCAGCCGCTATTAGATCTGCCCTAATGACCACAGCATACTCCACATACAAAAATGGCGAAACGATTCAAGACATATCCAACGGATCACCATCAACGCCGTTCGATATCGGAGCCGGACATGTAAATCCAACGGCTGCCCTCGATCCTGGCCTTGTTTACGATACCACCACCGACGATTACTTGGCCTTCCTCTGTGCCCTAAACTACAGCTCACTCCAAATTAAAGTAATCAGCAAGAAAGATTTCACATGCAATGGAAACAAGAACTACAAATTGGAGGATTTGAACTACCCTTCTTTTGCAGTTCCATTAGAAACACCTTCCACCAAAAGAGGTGAAAATGTTGCTCCGACCACCGTAAAATATACGAGGACACTGACCAACAAGGGTGCTCCATCGACGTATAAAGTGTCAGTGACGGCGAAAATTTCGTCAGTGAAGATTGTGGTGGCGCCAGAATCATTGAGTTTTACAGAGGCAAACGAGCAGAAGAGTTATACAGTGACTTTCATTGCTTCTCCAATGCCGTCGGGGTCTCAGAGCTTTGCTCGTCTGGAGTGGTCAGATGGGAAACACATTGTGGGAAGCCCCATTGCTTTCACTTGGACTTAA 2313 47.82 MKTCRVSQWFLLFLISFSSCSFTEAQKSNQQLKKKTYIIHMDKTSMPQAFDDHFQWYDTSLKSVSDSAQMLYSYNNVIHGFSTSLTVEEAKLMEKQEGIIAVMPEMKYELHTTRTPEFLGLGKSASFFPASAKVSEVIIGILDTGVWPELESFSDDGLGPIPASWKGECEVGKNFNSSSCNRKLIGARYFSKGYEAAFGPIDESQESKSPRDDDGHGSHTSTTAAGSAVTGANLFGFAAGTARGMAAEARVATYKVCWLGGCFSSDILAAIDKSVEDGCNIVSMSLGGNSADYYRDNVAIGAFSAAAQGVFVSCSAGNGGPSSSTLSNVAPWITTVGAGTLDRDFPAYVTLGNGKKITGESLYSGKPLPNSLLPIVSAASASNSSSGSLCLSGTLNPAKVAGKIVVCDRGGNSRVQKGLVVKEAGGLGMILANTEAYGEEQLADAHLIPTAAVGQEAGDAIKSYISSDSNPTATISTGTTRLGVQPSPVVAAFSSRGPNLLTPQILKPDLIAPGVNILAGWTGGAGPTGLDSDKRHVAFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKNGETIQDISNGSPSTPFDIGAGHVNPTAALDPGLVYDTTTDDYLAFLCALNYSSLQIKVISKKDFTCNGNKNYKLEDLNYPSFAVPLETPSTKRGENVAPTTVKYTRTLTNKGAPSTYKVSVTAKISSVKIVVAPESLSFTEANEQKSYTVTFIASPMPSGSQSFARLEWSDGKHIVGSPIAFTWT 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28252992 28255565 - MELO3C010817.2.1 Cme03g02092 324103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g02092 770 Gene3D - 342 482 - -
Cme03g02092 770 Pfam Subtilase family 135 586 IPR000209 GO:0006508|GO:0008236
Cme03g02092 770 Pfam PA domain 381 461 IPR003137 -
Cme03g02092 770 MobiDBLite consensus disorder prediction 201 224 - -
Cme03g02092 770 CDD Peptidases_S8_3 108 580 IPR034197 -
Cme03g02092 770 Pfam Peptidase inhibitor I9 36 111 IPR010259 -
Cme03g02092 770 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Cme03g02092 770 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Cme03g02092 770 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
Cme03g02092 770 Pfam Fibronectin type-III domain 661 766 IPR041469 -
Cme03g02092 770 Gene3D Peptidase S8/S53 domain 137 627 IPR036852 GO:0004252|GO:0006508
Cme03g02092 770 ProSiteProfiles Serine proteases, subtilase domain profile. 107 614 - -
Cme03g02092 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 24 768 - -
Cme03g02092 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 24 768 IPR045051 -
Cme03g02092 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
Cme03g02092 770 SUPERFAMILY PA domain 397 469 IPR046450 -
Cme03g02092 770 CDD PA_subtilisin_like 348 475 - -
Cme03g02092 770 Gene3D - 631 769 - -
Cme03g02092 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cme03g02092 770 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252|GO:0006508
Cme03g02092 770 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02092 Cme-Chr3:28252992 Cme06g00938 Cme-Chr6:6569971 0 dispersed
Cme03g02092 Cme-Chr3:28252992 Cme03g02101 Cme-Chr3:28316600 3.12E-175 proximal
Cme01g00577 Cme-Chr1:4409737 Cme03g02092 Cme-Chr3:28252992 0 transposed
Cme12g00903 Cme-Chr12:15866560 Cme03g02092 Cme-Chr3:28252992 6.68E-73 transposed
Cme03g02092 Cme-Chr3:28252992 Cme08g00624 Cme-Chr8:4015273 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g02092 - - csv:101207099 1440.63