Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g02127 ATGGCTTCTTGGTGGGGAAGAGAAAGTCACAAGGGAACCCCTGTTGTTGTGAAGATGGAAAATCCCAACTGGTCAATAGTTGAAGTTGAAAGTCCTTCTGATGATGACTTCATCATCGGCGCCGAGTCGCCACCGGGTCGAGCCCGAGACAAGGGACGAGGCAAAAATGCCAAACAGCTCACTTGGGTTCTTCTTCTTAAAGCCCACAAAGCCGCCGGTTGTTTAACCTCCATTGGCTCTGCATTGGTCAACATCGTCACCGTCGTTAAACGCCGTCTCGCTTCTGGAAGAACTGACGCCGACGCCGACGCCGACAATGACAACGCTGACGGCGGCGTGAGGGAGAACCCAACTGTTAAAACCAGGTTCTATTTGTTTATTAAGGTTTTCCTTTGGCTGTCGGTGCTTCTGTTAGGGTTTGAGTTGGCGGCTTATTATAAAGGTTGGCATTTTGAGGCACCCCATCTTCAATTGGACTACTTGTGGACAACCCCATTTGGGGTTAAGGATGTTTTTGACTGGTTTTATTCCAAATGGGTTTTGATTCGGGTTGCATATTTCGCTCCTCCTCTACAGTTTTTAGCCAATGTTTGTATAGTGTTGTTCCTCATTCAAACTTTGGATAGGCTTATTCTTTGTCTGGGTTGTTTCTGGATTCGATTCAAGAAAATCAAACCTGTTCCTAAGGTTGCTGCTATGGATCTTGAGTCTGGAGAAACTGGCTACTTCCCTATGGTTCTTGTTCAGATCCCAATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTGGACTGGCCAAAAGACAAGTTACTGATTCAGGTTCTTGATGATTCGGATGATTCAATCACCCAATTGCTGATCAAAGAGGAGGTACATAAATGGCAACAACTTGATGCCAAAATTGAATACCGACATCGGGTGATCCGAGAGGGATATAAGGCTGGAAATCTCAAGTCTGCCATGAATTGTAGCTCTGTCAAAGACTATGAGTTTGTTGCTATCTTTGATGCTGATTTTCAGCCTGCTTCTGATTTCCTCAAAAGAACAGTTCCTCATTTTAAGGATAATGAGGAACTAGGACTCGTTCAAGCACGATGGTCATTCGTGAACAAAGACGAGAACTTGCTAACCAGACTACAAAACATTAACTTAGCCTTCCATTTTGAAGTAGAGCAACAAGTGAATGGTGTGTTTCTCAATTTCTTTGGATTCAATGGAACTGCTGGTGTTTGGAGGATAAAGGCTCTTGAAGAAGCCGGTGGCTGGTTGGAAAGGACCACTGTTGAGGACATGGACATTGCCGTCCGTGCTCATCTTCATGGTTGGAAATTCATATTCCTCAATGATGTAGAGTGCCAATGTGAATTACCAGAATCGTATGAAGCATATAGAAAACAACAGCATAGATGGCATTCGGGACCAATGCAACTGTTTCGACTTTGTTTGCCAGATATAGTTCGTTCGAAGATTGGCATATCAAAGAAATTCAATTTGATCTTCCTCTTCTTTCTCTTACGGAAGCTGATACTGCCATTTTATTCATTTACCCTCTTCTGCATAATTCTCCCTATGACGATGTTTGTTCCTGAAGCTGAGTTGCCGGCGTGGGTTGTATGCTACATTCCTGCTACAATGTCCTTTCTCAACATCCTTCCAGCACCAAAGTTCTTCCCCTTCATTGTTCCTTACCTCCTCTTTGAGAATACTATGTCAGTAACCAAGTTCAACGCAATGGTCTCGGGACTTTTTCAGCTAGGTAGTGCATATGAGTGGGTTGTTACGAAGAAATCAGGCCGCTCGTCTGAGGGTGATCTTTCCTTAATGGTTGAGAAGAAAAAGATGAACTCTGAAAAGAGTGTCTCAGCAAACAACCTTGAGGAAATTGAGTTAATCCAAAAACAGGACAAGAAGTTGCCAAGGAAGAAGCATAACAGAATATACATGAAGGAGCTAGCACTAGCTTTCCTTCTTTTAACAGCCTCAGCTAGAAGCCTCCTCTCAGCTCAAGGGATTCATTTCTACTTCCTACTGTTTCAGGGAATATCCTTCCTCCTCGTTGGTCTAGACTTGATCGGCGAGCAGGTTGTTTAA 2109 43.72 MASWWGRESHKGTPVVVKMENPNWSIVEVESPSDDDFIIGAESPPGRARDKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALVNIVTVVKRRLASGRTDADADADNDNADGGVRENPTVKTRFYLFIKVFLWLSVLLLGFELAAYYKGWHFEAPHLQLDYLWTTPFGVKDVFDWFYSKWVLIRVAYFAPPLQFLANVCIVLFLIQTLDRLILCLGCFWIRFKKIKPVPKVAAMDLESGETGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDSITQLLIKEEVHKWQQLDAKIEYRHRVIREGYKAGNLKSAMNCSSVKDYEFVAIFDADFQPASDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSKIGISKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLSLMVEKKKMNSEKSVSANNLEEIELIQKQDKKLPRKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVV 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28494790 28498909 - MELO3C010782.2.1 Cme03g02127 324138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g02127 702 Pfam Glycosyl transferase family group 2 338 544 IPR001173 -
Cme03g02127 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
Cme03g02127 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 524 IPR029044 -
Cme03g02127 702 PANTHER - 8 701 - -
Cme03g02127 702 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 8 701 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02127 Cme-Chr3:28494790 Cme04g00326 Cme-Chr4:2611900 0 dispersed
Cme01g01858 Cme-Chr1:26514541 Cme03g02127 Cme-Chr3:28494790 0 transposed
Cme03g02127 Cme-Chr3:28494790 Cme07g00257 Cme-Chr7:1672646 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g02127 - - csv:101203245 1348.95