Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g02155 ATGTTGAACCTCTTCTCTTCATCTCACCGCATTTCCATTTCCATCTTCATCTTCCTCTTCTCTGCGCCGTTGCTCCCTTCCTCCTCCCTCTCCGACTCCGATCAACCGCTTCTCGCTAACGCTACGCTCCTGTCCAATAATGTTTCCGTTCCGAGGAATAAGGAAGGTAGTTTTGCTGACATCATTGATCGTGCTTTGGAGAATGAGTTCAAGGAGAATGACCAGAATGAAGCAATTGATGCAGGAAGCTTTAACAACAGTGTAGCAGAGCAGCAGGCAACTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAACGTTTTCAATTTGGACAGTGATAATAGAGCTGAAGATACCCCTACATTGATTGATCGAAAGGACAATGTCTTTATCATATCTAACTTCAAGTCTAAATATCCAGTGCTGCAATTAGACTTGAGATTGATATCTGATTTGGTTATCGTAATTGTCTCTGCAACTTGTGGTGGCATTGCCTTCGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCTGGAGGATTTAACTTTGTCAGTGAAATGGTTCAAGTTGAAACGGTAGCTCAATTTGGTGTAATTTTTCTTCTTTTTGCATTGGGTTTGGAGTTCTCAACAACTAAGCTACGAGTTGTTCGTGCAGTTGCTGTTCTTGGTGGGCTTCTCCAAATTTTCCTATTTATGTGCCTCAGTGGGATCACAGCCTCGTCATGTGGTGGGAGTGCTTCTGAAGGAGTTTTTGTTGGAGCGTTCCTATCTATGTCCTCAACAGCAGTGGTGCTGAAGTTTCTGATGGAAAAGAACTCTACTAATGCTCTTCATGGACAAGTCACAATCGGCACCCTTATTTTGCAGGACTGTGCTGTTGGGTTACTGTTTGCTTTGCTTCCAGTACTAGGTGGGAATTCTGGTATTCTTCAAGGAGTGATGTCTATGAGTAAAGTGTACGTATAA 1026 42.88 MLNLFSSSHRISISIFIFLFSAPLLPSSSLSDSDQPLLANATLLSNNVSVPRNKEGSFADIIDRALENEFKENDQNEAIDAGSFNNSVAEQQATLETVARVKSKKNDTKEEKFQLQNVFNLDSDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLSGITASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVMSMSKVYV 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28673606 28687304 - MELO3C010757.2.1 Cme03g02155 324166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g02155 341 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 13 341 IPR045158 GO:0015386|GO:0071805|GO:1902600
Cme03g02155 341 Gene3D - 157 341 IPR038770 -
Cme03g02155 341 Pfam Sodium/hydrogen exchanger family 164 328 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cme03g02155 341 PANTHER K(+) EFFLUX ANTIPORTER 6 13 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02155 Cme-Chr3:28673606 Cme06g00928 Cme-Chr6:6511481 3.83E-132 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g02155 - - csv:101217282 582.022