Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g02159 ATGTTCTTCTTCGAGGATTTGTTGCAGGTGCTCTGTATTCGAGGTTTTCAGGATAAAACTCGACTTCTTTCTGAGTCTTTTATACGGACCGTATCTGAATCCATGACCAATTCTGCATGTGGGGTTTCAGAGGTAGAACTCTGTAGAAACGATTCGGCTGCACTTCATTTTAAATTAATCGCCATCGCGTCAATTTTAACAGCCGGAGTCATCGGGATCGCCATTCCGTTGTTTGGTAAACAGCGTCGGTTTCTCAAAACAGACGGCAACCTGTTCGTGGCCGCGAAGGCGTTTGCCGCCGGTGTGATTCTAGCCACCGCTTTCGTCCATATGCTTCCGGATGGATCGAAAGCTCTCTCCGATCCGTGCTTGCCGGAATTTCCATGGTCGAAATTCCCCTTCTCGGGGTTCTTCGCGATGATGGCGTCGCTTTTGACGCTGCTCGTGGATTTCGTCGGAACTCAGTACTACGAGCGGAAACAGGGAATGATTCGGTCGAAAGAGGAGGCGAATCGGGTCGGGTCGTTGGTAGATACCGGGTTGGAATCCGGCATTGTTCCGGCTGGAGAATTGAACGTGAAAGTGTTTGGGGAAGAGGATGGCGGCGGGATGCACATCGTGGGAATGCACGCCCACGCCGCCCACCACCGGCACAATCATCCACAAGGGAAGGAGGCATGTGACGGGCACGTGGCAGTTCATGATCATGGGCATGGACATGCCCATGGACACGGCCATTCTCATGGGCTGGACGTCGATGATGACGAAAGCGGTGTGCGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTGATAATTGGGCTGTCTCTAGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCCCTTTCCTTCCATCAGTTCTTTGAAGGCTTTGCCCTTGGTGGCTGCATTTCTCAGGCTCAATTCAACACTCTCTCCACCTCCCTCATGGCTGTCTTCTTTGCCATCACCACACCCCTCGGGATCGCCGTAGGCGCTGCCGTTGCCTCCACCTATAACCCCAACAGCACCGGGGCGTTGGTTGCTGAAGGCATTTTGGACTCTCTGTCAGCTGGGATTCTGGTGTACATGGCTCTCGTTGATCTGATTGCGGCCGACTTTCTTAGCAAGAGAATGAGCTGCAATTTTAGACTGCAACTTGTTTCGTATTGTACTCTCTTCCTCGGCGCGGGGTTGATGTCTTCGCTCGCACTTTGGGCTTGA 1254 52.31 MFFFEDLLQVLCIRGFQDKTRLLSESFIRTVSESMTNSACGVSEVELCRNDSAALHFKLIAIASILTAGVIGIAIPLFGKQRRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSKALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGMIRSKEEANRVGSLVDTGLESGIVPAGELNVKVFGEEDGGGMHIVGMHAHAAHHRHNHPQGKEACDGHVAVHDHGHGHAHGHGHSHGLDVDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPLGIAVGAAVASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQLVSYCTLFLGAGLMSSLALWA 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28711190 28714919 - MELO3C010753.2.1 Cme03g02159 324170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g02159 417 TIGRFAM zip: ZIP zinc/iron transport family 40 417 IPR004698 GO:0005385|GO:0016021|GO:0071577
Cme03g02159 417 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 35 417 - -
Cme03g02159 417 Pfam ZIP Zinc transporter 56 414 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cme03g02159 417 PANTHER ZINC/IRON TRANSPORTER 35 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02159 Cme-Chr3:28711190 Cme12g00970 Cme-Chr12:16943369 5.86E-87 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g02159 K14709 - csv:101218224 772.311