Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme03g02205 ATGGCTTCCATTTCACCTTACCGCCCAAACTTTGTGTTCTCTTCATTTCCGAGTCGTGTTCCCAACTCAAATCCTCTATTTCATGGAGTCCAATTCCGAGGCTTATCCCATCATAAGCCTTTCCTTCGCGGTTCTCTTGCTGTCGCGAGATTTGGGTTTAAACCCGAGTTCTTGCCTGACCCGGATAACGCCGAGGGCTTTGTTAGAGATTTGTTTGGCAAAGCTGAGAGCTTTCTTTACACGATTGCCGACGCCGCCGTGTCTGCTTCGCCGGAGAATGTTACTACCGCCAAGCAGACGGACGATTGGTTTACGGGGATTACCAATTATATGGAGAGCGTCCTTAAAATTCTTAAGGATGGACTTTCTGCTCTACATGTTCCTTATGCCTATGGCTTTGCCATTATACTTCTTACAGTTCTTGTTAAGGCTGCTACGTTTCCTTTGACAAAGAAGCAGGTAGAATCTGCAATGGCGATGCGTTCTTTGCAACCACAAGTGAAGGCTGTTCAACAACGCTATGCTGGGGATCAGGAGAGGATTCAACTTGAGACTGCTCGACTGTACAAATTAGCTGGCATAAACCCACTGGCAGGATGCCTACCCACGTTGGCAACAATTCCTGTATGGATTGGACTATACAGAGCTCTCTCAAATGTGGCCAATGAGGGTCTCCTCACGGAAGGTTTTTTCTGGATACCCTCTCTGGCTGGTCCAACTACGATTGCGTCCCGACAAAATGGGAGTGGTATTTCTTGGCTCTTTCCATTTGTTGAAGGTCATCCTCCACTTGGGTGGTCAGATACCTTTGCATATCTTGTTTTGCCTGTGTTGCTGGTCGTTTCGCAGTACATCTCTGTTCAAATTATGCAATCATCGCAGAATAATGATCCAAGCATGAAGAGTTCTCAAGCCATAACGAAGTTCCTACCATTAATGATTGGATATTTTGCTCTTTCAGTTCCTTCTGGTCTAAGTCTCTATTGGCTCACCAATAACATCTTGAGCACAGCTCAGCAAGCTTGGCTTCAAAAGGCAGGTGGCGCAAAAACCCTGGACAAACAGTTCATCGATGAAATCGTGAAACAAGAAGAAAAACAAGCCCGAGTCCAGAGCGAAGCGCCCAAGTTAAACTCAATATCAAGTAGCACAGTAGCTCGACAAGAAGAGAAGCTGACAGCAGAAGGGCTAAAGCCTGGTGAAAGATTTAAACGGTTAAAGGAGCAAGAGGCTAGGTTAAGACAGCAAAGAGAAGAAGAAAAAGGGAAAGCGGAAGAGTCTGCCAAGGTTGAATCTCTGACAATAAATGACAGGGACAAGAGCGCATCTGTTGGAGTTGTTGTCAATGGTAGTCTTTCTAGGCAGGAGGATGTAAAGGAAGATCGAAATTCCATACCCACGACTACTATGCAAAGAAACGATGTGGATAGTGAGCCAAGTGCAACTCAGGGAGAGGGAGTGCTCGAGACATACACTAGGGTTGCCAAGGATGCCAAATTAAACGGAGAAGAACAAAGAGAGTAA 1524 45.8 MASISPYRPNFVFSSFPSRVPNSNPLFHGVQFRGLSHHKPFLRGSLAVARFGFKPEFLPDPDNAEGFVRDLFGKAESFLYTIADAAVSASPENVTTAKQTDDWFTGITNYMESVLKILKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIASRQNGSGISWLFPFVEGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQNNDPSMKSSQAITKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKAGGAKTLDKQFIDEIVKQEEKQARVQSEAPKLNSISSSTVARQEEKLTAEGLKPGERFKRLKEQEARLRQQREEEKGKAEESAKVESLTINDRDKSASVGVVVNGSLSRQEDVKEDRNSIPTTTMQRNDVDSEPSATQGEGVLETYTRVAKDAKLNGEEQRE 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28964049 28968505 + MELO3C010707.2.1 Cme03g02205 324216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme03g02205 507 Pfam 60Kd inner membrane protein 131 345 IPR001708 GO:0016021|GO:0032977
Cme03g02205 507 MobiDBLite consensus disorder prediction 391 436 - -
Cme03g02205 507 MobiDBLite consensus disorder prediction 371 507 - -
Cme03g02205 507 PANTHER BNAA09G28180D PROTEIN 73 427 - -
Cme03g02205 507 MobiDBLite consensus disorder prediction 372 389 - -
Cme03g02205 507 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 131 345 IPR028055 -
Cme03g02205 507 Coils Coil 403 426 - -
Cme03g02205 507 PANTHER OXA1 73 427 IPR001708 GO:0016021|GO:0032977
Cme03g02205 507 MobiDBLite consensus disorder prediction 464 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02205 Cme-Chr3:28964049 Cme12g00204 Cme-Chr12:2121728 2.44E-130 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme03g02205 K03217 - csv:101205346 935.25