Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme04g00023 | ATGGCGTTGGCGGTGAAGGCTTTTCCGTTAACAGTGGTGAGTCATGTGGTGGGAATCGTGGCGGTGATACTGGTGTTGGTTTGGACCATTCATTTCAGGGGCGGCCTTGCTTGGGAAGCTGTTAATAAGAACCTCATCTTCAACATTCATCCTTTTCTTATGCTACTGGGATTGATCGTCATAGGAGGTGAAGCAATAATTAGTTACAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATTCATTTGGTATTACACGGAGTCGCATTGGTACTTGGTATTGTAGGGATAATCGCAGCATTCAAAAACCATAATGAAAGTGGAATTGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGGGTTATTAGCCTTTATGCTCTTCAGTGGGTGTACGGGTTTGTTACATTCTTCTACCCGGGAGGATCGGCGGATCTTCGAAGAGTATCACTCCCTTGGCACGTCGTATTTGGGCTCACCGTTTACATACTGGCCGTTGGGAACTCGGCCTTGGGTTTCCTTGAGAAGCTCACATTTCTGGAGAGCTCCGGCATCCCCAAGTACGGGACGGAGGCTTTTCTTGTCAATTTCACTGCCATCACCACTATCATTTTTGGAGTCTTTGTCATATTCTCTGTTATTTCTCAGCCTTGCGCTCAACCAGAAGACGACCATGGCGCTTATTCTGCTATATGA | 702 | 45.44 | MALAVKAFPLTVVSHVVGIVAVILVLVWTIHFRGGLAWEAVNKNLIFNIHPFLMLLGLIVIGGEAIISYKSLPLRKEVKKVIHLVLHGVALVLGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYALQWVYGFVTFFYPGGSADLRRVSLPWHVVFGLTVYILAVGNSALGFLEKLTFLESSGIPKYGTEAFLVNFTAITTIIFGVFVIFSVISQPCAQPEDDHGAYSAI | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 159143 | 162992 | - | MELO3C003324.2.1 | Cme04g00023 | 324284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme04g00023 | 233 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Cme04g00023 | 233 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Cme04g00023 | 233 | PANTHER | CYTOCHROME B561-RELATED | 1 | 233 | IPR043205 | GO:0016491 | |
| Cme04g00023 | 233 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 | 1 | 233 | - | - | |
| Cme04g00023 | 233 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Cme04g00023 | 233 | Gene3D | - | 2 | 224 | - | - | |
| Cme04g00023 | 233 | SMART | 561_7 | 49 | 175 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme04g00023 | Cme-Chr4:159143 | Cme09g01298 | Cme-Chr9:17985551 | 2.52E-58 | dispersed | |
| Cme04g00023 | Cme-Chr4:159143 | Cme09g00161 | Cme-Chr9:1234506 | 2.50E-54 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme04g00023 | K08360 | - | csv:101209308 | 395.201 |