Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme04g00049 ATGTTGGAGGATCAAGTGGCGTACTTATTGCAGAGGTACCTTGGGAATTATGTACGAGGACTCAATAAGGAGGCTCTGAAGATCAGTGTATGGCAAGGTGATGTCGAGCTAACAAACATGCAGCTGAAGCCAGAGGCACTAAATGCATTGAAGTTGCCAGTGAAAGTTAAAGCCGGCTTTCTTGGATCAGTCAAAATTAAGGTTCCATGGAGCAGACTTGGTCAAGATCCTGTCATAGTGTATTTGGATCGAATTTTCTTATTAGCTGAGCCTGCTACGGAAGTTGAAGGACACAGCGAAGATGTTATCCAAGAGGTCAAGAAAACTAGACTTCGTGAAATGGAAATCAAGCTTTTGGAGAGGATGCAGCGAACAAAGACAGAAATGAATAATTCGTGGTTGGGATCACTGGTCAGCACAATAATTGGAAATTTAAAGCTTTCCATATCAAATATTCACATCAGATATGAGGATATTGAAAGCAATCCTGGACATCCATTTGCAGCTGGTGTAAGTTTAGAAAAACTTTCAGCTGTCACAGTAGATGATGATGGGAAGGAGACTTTCATAACTGGTGGTGCACTTGATCGTATTCAGAAGTTTGTTGAACTCAACCAGTTAGCAGTTTACCTTGATTGTGATATATCCCCTTGGTATCTAGATAAACCGTGGGAGGCTTTACATCCATCGGAGTGGGACAAAGTATTTCGCTTCGGTACCAAAAATGGGAAACCGGCTGAAGGTCTTACGAAGAAGCACGGGTATATCTTGCAACCAGTGTCTGGATATGCAAGGTATACAAAGTTGCGGGAAAATGATCTTGCAGATAGCCATGAACCTCTACAGAAAGCATCAGTATATTTGGATGACGTGACACTTTGTTTGTCAAAGAACGGGTATAGGGATATTCTAAAGTTAATCGATAATTTTGCTGCATTCAATCAGCGATTGAAGTATGCTCATTATCGACCTCACGTTTCTGTGAAAACTGATCCTAGTTCCTGGTGGAAGTATGCTTTTAATTCAATTTCTGACCAGTTGAAGAAGGGAAGTGGAAAAATGTCATGGGAGCAGGTTCTGAAGTTTGCCAACTTACGTAAGAGATATATCTCTTTATATGCTTCGTTGCTTAAATCTGATCCTACTCGTGCAATTGTTGATGATGACAAACATATTGAGGAACTTGATCGTGAACTGGATATTGAGCTGATTCTCCAATGGAGGATGCTCGCTCACAAGTTTGTTCAAAAGTCGGTGGAATCTGACCAGTACTTGAAGAAAGCAAAAGCGAAAAAATCTTGGTGGCCATTTGGATGGAATAATCAATCATTTAAAGATGAAGAAGAACAATTTTTTAGTCAAGAAGACTGGGAACAACTGAACAAATTTATAGGGTACAAGGAAGATGAAAATTCACTGTCCATAAACGTTGGCAAAGTGGACACTCTTCTTACTTCTTTGGAGGTTCACATGAACCGTAATGCTTCAAAGCTTACCGATGAGGCCCAACATTGTCTTGCTGAACTGTCATGTGAAGACCTTAACTGTTCCATGAAACTTTTTCCAGAAACGAAAGTTTTTGACATCAATTTGGGGTCATATCAACTATCGTCTCCAAGTGGTCTCCTTGCTGTGAGTGCTGCTGTTCATGATTCGTTGGTTGGTGTCTTCCGGTACAAGCCTTTTGATGCCAAAGTGGACTGGAGCTTGGTTGCGAAGGCTTCTCCTTGTTATGTGACTTATCTCAAAGATGCCATCGAACAAATTATGAACTTCTTCGAGAGCAGCACTGCTCTTGGTCAGACTGTGGCATTGGAAACAGCAGCTGCCTTACAGATGACAATTGATGAAGTTAAGCGTAGTGCTCAGCACCAAGTGAATAGAGCATTGAAAGATCGTTCGAGGTTTCTGCTGGACTTGGATATTGCAGCTCCTAAGATTACAATTCCTGCGGAGTTTCATCTTGATGATATCAATTCGATAAAGCTTCTGATTGATTTGGGTAATTTGCTGATACGAACACAGGATGACCTGGAAAACGTGTCTTCTCAAGAGTTGGATATGTATTTGCAATTTGATGTGGTCTTGAGTGATGTCTCTGCCTTTTTAGTTGATGGGGATTACAACTGGAATCAAATTTTTGGCAAAGATACTCACAAATCTCCCCGTGTAACAGAAATTAACATCATGCCTGTTATTGATAAATGTGGGATTATCTTAAAACTGCAACAGATTCGGTTGGAGAATCCGTCTTACCCTTCAACAAGACTTGCAGTGCGATTGCCTTCTTTAGGGTTTCACTTTTCGCCAGCAAGGTATCATCGACTATTAAAAATTTTGAAGATCTTCCAGGAGGATAATACAAATTCAGATGTTCCTCAACCGTGGAATCAAGCTGACTTTGAGGGGTGGCTATCCGTTCTTATTAGGAAGGGTGTTGGAAATAGGGAGGCTGAATGGCAACGGCGATATTGTTGTCTAGTAGGGCCCTATCTCTACTTAATTGAAAGCCCAGGATCCAAATCATACAATCAATATCTCAGCTTAAGAGGAAAACAAACCATTCAACTGCCGGCAGAGTTGGTTGGCGAGGTGCAACATGTTTTGGCTGTTTACGATGCGTCACGAGCAAATAGCAAGATTGTGGAGGATACTAGTGCCCTCATACTGAGGTTTGATTCCGATGACTCAAGGAAAGTGTGGCAAAACCGCTTGCAAGGAGCCATATATCGTGCTTCGGCCTCTGCTCCTATTTTGGGTCTATCTGAAACTTCCTCAAACTCTGAGGACTCAGAAATGGAACCGGATGAAAGTGATGGATCCATGGATTCATCTATCGAGAGTGTATTTTTGACTGGTTCTCTTGATGAACTTAAAGTCTGTTTCAGTTCTAGTAATCAGCATGGCCAAAACTTTGAGAAGGTCCTTCTTGCAGAAGAAAGAAATTTGATTGAGTTCCGGGCAATTGGTGGTCAGGTCGAGCTGTCAATGAGATCAAATGACATGTTTATTGGCACTATACTGAAGTCCTTGGAAATTGAAGACTTAGTTTGTTCAAAGACCAATTCCCAATCTTGTTATTTGGCAAGATCATTTGTTCATGGGGAAGAGACACCTTTGTTAAAAAACCATGGTTCTGATAACAGTGATTTAACTCAAATAGAAGGTGATGATAAATTCTTTGAGGCACCCGAAACCTTGGTTGACTACACTGATTATCAGATACAATCACCCAGAAAAGGTCTTGAGTATGTAAAATCTCAAAGTTCGCTCCAATTGAAAAATTTTGCACCCCCCAGCTTTTCACGCATTGCTGGTCTGCTTCCACCTGGTGGCTCTGAAACTCATAGTGTGGATAATGAGCAATCTGTTACATTAGATAATTTTATAAAAGCTCAAATAGCTCTTTATGACCAAAATTCTCCTCGATACTATGATGTAGACAAACAGGTTTCTGTTACCTTGGCTACATTGTCATTTTTCTGTCGTAGACCTACAGTTTTAGCCCTTATTGAGTTTGCCAATGCCATTAACCTGGAGGAAGAAAGTTGTGAGTCATTCAGTGATCATTCATCATCAGGTATCATAAAGCATGATATTCAAATGGAAGATGATGAACAGTTTTCAAAGAACACGGAGGATGGCATTGTGAAAGGTTTGCTAGGAAAAGGGAGGTCTAGAGTTGTATTCAGTTTAGAATTGAAGATGTCTCGTGCACAAATTTTTCTAGTGAAGGAAAATGAAAGTAATCTAGCAAGTTTGTTTCAGGACAACTTGCTTGCAAATATCAAGGTGTTTCCGTCCTCTTTTAGTATAGAGGCTGCTCTTGGAAATCTGAGAATAAGTGATGATAGTCTTTCAAGCAGCCACATGTATTATTGGGCATGTGATATGAGAAATCCTGGTGGCAGTTCTTTTGTTGAGCTATTCTTTTCTTCATTCAATGTCGATGATGAAGATTACAATGGTTATGAATACAGTCTTCTGGGGAAGCTTTCAGAAGTACGCATTGTATATTTGAATCGATTTGTCCAGGAGGTTGTTAGTTACTTCGTGGGTCTCGTCCCTGAAAATACTGAGGGTGTTGTGAAGTTAAAAGATCAAGTAACGAATTCAGAGAAGTGGTTTACCACTACTGAAATAGAAGGTTCGCCTGCTTTGAAGTTGGATCTTTCTCTTTCAAAGCCTATAATATTAATGCCCCGAAGAACAGACAGTCTTGATTATTTGAAGCTTGATATTGTCCATATTACCATTCAGAACACATTTCAGTGGATTTCGGGGAGTAAAACAGACATGAGCGCTGTGCATTTGGAAATTTTAACTGTTCTGATTGATGACATCAATTTAAATGTTGCTGTGGGAGCGGAATTAGGGGACAGCATAATTGAAGATGTTAAGGGGGTTTCAGTGATCATCCGCAGGTCACTTCGGGATTTGTTGCATCAAATACCAAGTCTAGAAGTTGGAATTCAGATAGGAGTGTTGAAAGCAGTTCTTTCAAACAAAGAGTACCAGATCATCACTGAATGTGCAATGTCAAATATCTCCGAGACAGCAAATGTTGTCCCTCCATTGAAAAATATTCCTGCTGCTTCAACTGATATAATAGAACCTGATACTCACCAGGTTCTAAATGGGACGGAACCTGAAACAAGTGAACCATTCTCAGTGTCAATGAAACTCTCTGTTATTATTGACCTGGTTCAGTTGTGCTTGCGTGCAGGAATATCCGGAGATGCATCTTTAGCCACTGTGCAGGCTAGTAATGCATGGGTATTGTACAACTCCAATACAAATGGTGAAGGTTTTCTTTCAGCAACACTCAAGGGTTTCACTGTTCTTGATGACCGTGAGGGGACTGAACTGGAATTCAGGCGGGCAATTGGAGTTGCTAACAGCATCAGTACAGCTTGGCTGCAGATACCAACTGATAAGCCCAATCAACTTTCAACTGATGCAAGTAGCATAGAAGAAAATATTTCTCAAGCAGTTCCTGCAATGCTTATCCTTGATGCAAAATTCACACAGTTGTCAACATTTGTTTCATTATCAGTTCAAAAACCTCAACTTCTTGTCGCACTTGATTTTCTCCTGGCCGTTGTTGAATTTTTTGTTCCAACTGTTGGCAATATATTGTCAGATGAAGAAGATAAGAGCTACTTACATGTTACTGATGCTGTTATCTTGGATCAGTCACCTTATAGGCAGCCATCATCCAAACTGCATATATCTCCAGGAAAACCGTTAGTAGCTGATGATGAAAATTTTGATCATTTCATCTATGATGGTAATGGTGGAGTAATGCATTTAACGGATAGAAACGGAGTTGATCTTTCAGCACCTAGCAAGGAGGCAATGATATATGTCGGAAATGGGAAGAAATTGCAGTTCAAAAACATCACTATCAAAGGTGGACAATTTTTGGATTCCTGTGTTTTTATGGGTACCAACAGCAGTTATTCAGCATCTAAGCAAGATAAGGTGTACTTGGAGTTGGGGGATAACGTTGTCCAACAAAGCTCTCAAGATGTACAATCTCAAGATATTACCAGCAACAAGTCTACTGAGTATACTATTGAATTGCAGGCAATTGGCCCTGAGCTGATTTTCTACAACACATCAAGGGAAGTAGGGGAATCAACAATCCTCCAAAACCAACTTTTGCATGCTCAACTGGATGTATATTGCAGTAATGTTCTACATGCTTATCATGCCTATAGGCTTCTTCTGAAAGGTGATACAACTGAGTTTAGTGCAAATGCACTCGGTTTGACCATGGAGAGTAATGGAATCCGGATTCTGGAGCCCTTTGATTCCTCAGTAAATTATTCGAATGCTTCTGGAAAGACGAATATACATTTATCTGTTTCAGATATATTTATAAACTTTTCATTCAGCATCTTGAGGCTGTTTTTAGCTGTTGAAGAGGACATTGTGGCATTTCTAAGAATGACGTCGAAGAAAATGACTGTAGTATGCTCCGAGTTTGACAAAGTCGGAACAATCAAAAGTCTGAACAGCGATCAAGTATATTCTTTTTGGAGGCCTAAGGCTCCACCTGGTTTTGCCATTTTGGGCGACTATGTTACACCATCTGAAAAACCACCAACAAAAGGAGTTCTAGCTGTAAATACCAACTTTGCAAGGCTAAAGCGACCTATATCTTTCAGACTAATATGGCCACCGGTAGCTTCTCAAGACATTTCTAGTTATCACATCAACAATTATGATTCTTCACCTGGTGATGATAATCTGGGACAAGAGGATTGCTTTTATTCCATTTGGTTTCCTGAAGCACCCAAAGGATATGTTGCACTTGGTTGCGTTGTCTCCAATGGAAATACGCAACCGCCAGTATCTGCTGTTTTCTGCATTGCCTCTTCCTTAGTTTCTGCTTGTTCCTTGAGGGACTGTATAAGTATCAGCACCAGTGTACCGTGCCATTCAGATTTTGCTTTATGGCGTGTGGACAATGCTGCTGGATCTTTCTTGCCAGCAGATCCAACAACTTTTAGTGTGAGAGGTACTGCATATGAACTGCGTCGCACAATTTTTGGGTTTCCTGATGTGTATCATGAAGTGACTAAGAGTTCAGATAGTCATGCTTTGCCTGGTCAAACTGAGACCTCACATTTGGAGAAATCACCTATAGTAACTTCTGGTCAGCGTTTTGAGGCTGTTGCTGACTTTCAGTTGATATGGTGGAATCGAGGATCAAATTCCAAGAAGAAACTATCAATATGGCGTCCAGTTGTTCCTCAGGGAAAGATTTTTTTTGGTGATGTTGCTATCAAAGGTCTAAGTTTCATGGTTAACTCGTGGTTTTCATCTGGACTCAGATTTGAGCGTCCAAGTACGTCTATTGTTCTTCATCATACTGGAGATGAAGAGTTGTACGAGTCTCCACTAGATTTCCAACTTGTGGGACAAATCAAGAATCAAAGAGGAATGGAAGATATATCTTTCTGGTTGCCACAAGCTCCTCCAGGGTTTGTTTCCTTGGGTTGTATTGCATGCAAACATAAGCCTAAACTACAAGACTTCAGTGCATTGGGATGCATGCGGATGGATATGGTAACATGGGATCAGCTCATGGAGGAAAGTGCCTGGGATTCTTCAGATGCTAAGCTAATAACTGAGCCATTCAGCTTATGGATAGTTGGTATTGAGTTAGGGACCTTTGTTGTGCGGAGCGGGCCTAAGAGGCCTCAGAGGAGCTTCAATCTTAAGCTGGCAGAATCACATGTAACAAGTGGTTCAGATAACACTGTAATTGATGCAAAAGTGAGAACACTTTCTATAGCGGTCTTTGATGACTATGCTGGTTTGATGGTTCCATTATTTAATATATCGCTTAGCGGGCTGGGATTTAGTCTTCATGGAAGAAAGGGATATTTAAATTCCGTTGTGAACTTCTTTTTGGCTGCCAGATCATATAATGATAAGTACGAATCTTGGGAGCCACTTGTTGAACCAGTAGATGGATTTCTGAGGTACCACTACGATCAAAATGCCCCTGGATCAGCTTCTCAGTTGCATCTTACCACCGCTAGGGATTTAAATATGAATATTTCAGCATCTAGCATCAATATGCTTATTCAAGCATATGCAAGCTGGATCAACCTCACGCATGTTCAGGAGCATAACAAAACAAGAGACTCGTTGTTTTCCACTTCTGGTGGAAAGAGTATCGGTGATGTGCATGCCAAGAGAGACTATTTCATCATCCCACAAAACAAACTTGGGCAGGACATTTACATCCGAGCTACAGAAATACGTGGTCTTCAAAATGTAATTAGGATGCCTTCAGGGGACATGAAGCCCCTAAAAGTTCCTGTTTCAAAGAACATGTTAGATTCCCATTTGGAAGGAAAACGTTTTAAGAAGGATAGGAGAATGGTGACGATAATAATTTCTGATGGACAGTTGCCAAGGGTTGAAGGACCAGCTGTTCACCAATATACTGTAGCTGTTCGTCTTACTCCCGTACAAGGAGTTTTTGCTGAATTGCAACATCAGCAGAGTGCACGAACATCCAGAAGTAGCTCAGACCATTCATTATCCGCTGAGGTTGACTTAGTTCACTGGAACGAAATATTCTTTTTCAAAGTTGAATCACCGATAGCACAGATCTTGGAGGATGAATTTCATTTGCATGATCACGTAAATAGGATAAGCAGTATAGAACTTGCTTCACCAGAATTGGGGAAACTAGGCAAGTGGAGTGGAAGATTAAATTGTACTGTGCTTTTGTCGCCCAAACCGGAATTTGAGAACATTTATCAATCTAAAAAAGGAGGAAGAAAATCTGGATCGATTCAAATAAGTCCGAGCAGGACTGGGCCTTGGACTACTGTTAGGTTAAACTATGCTACACCAGCTGCCTGTTGGCGCTTGGGGAATGATGTCATTGCCAGCCAAGTGACTGTCAAGGATAGCAGCCGATACGTGACAATAAGGTCTCTTGTCTCAGTGCAGAACAATACTGATTTTATACTTGATGTATGCCTCGTGTCCAAACATTACAAGGAAGGCATACATCTCCTGGATGAAACTGGTAACTCTGATGGTTCAATCACCGGTAGTAACATGGTAGTTGTAGAAGAGTTCTATGAAACTGAAAAGTACATCCCCACTGCTGGCTGGATTAGCTGCCTGAAACTCAGTCGGGATTTTTCAGAAGGAATTATCCCGGAGATAACATCAAGAGTTGAGCTACCATCAGGTTGGGAATGGATCGATGATTGGCATTTGGACAAGACACCTCATACTGCTGCTGATGGTTGGGTTTATGCTCCAGATGTCAAAAGTTTAAAATGGCCTGATTCCTCTGACACAAAATCTGTAAACCATGCAAGGCAAAGGAGGTGGGTCAGAAATAGGAGACAGATCGTAAACAATATAAAGAAGGAAGTATTCATTGGGCAGTTGAAGCCAGGTGATACAGTTCCTCTACCTCTATCAGTGCTGAAACATTCTGGACTTTATATCTTTCATTTTAGGCCTGCGACTCTTAATAATTGTGATGAGTACTCTTGGAGTTCAGTTGTAGATAAACCTAATAAAGAAGATGTTAATGGGCCTGATATTCTTTCTGAAATATGTATTTCAACCCTAAGTGAATCTGAGGAGTTGTTGTACTGTGTTCAGACAAGTGGAACTTCATCAAGTAGTTCCCATATATTATGGTTTTGTTTAGGCATACAAGCATTGGAAATTGCCAAAGATATACACTCTGACCCCATTCAGGACTGGAATCTTGTTATCAAGGCTCCATTATCTATTGCCAATTACCTTCCACTTGTTACAGAATTTTCTGTTCTAGAGAAACAGAAAAGTGGCCATTTCATTGATTGCTGCAGAGCAATCCTTCATCCAGGGAAAACTGTGAAGGTCTACGATGCTGATATCAGAAATCCATTGTTCTTTTCACTCCTCCCACAGAGGGGATGGCTTCCTGTACATGAAGCAGTTCTTATATCCCATCCTCATGGAGTTCCATCAAGAACATTAAGTTTGAGAAGTTCAATTACCGGAAGGGTTGTTCAAGTTATTCTTGAACAAAATCATAATAAGGAACATCCATTTCTGGAGAAGATCATCAGATTCTATGCACCCTACTGGTTTTCTATTTCTAGATGCCCTCCTCTCACACTCCATCTTGTAGACAGATCAGGGAGAAAAAAATCCCGAAAGATTTACCACCGGTTTAAGTCCAACACTGATACCGACACATTTGAGGAAATAACTGCAGAAGAAATACACGAAGGTTATACAATCGCTTCTGCTCTGAACTTCAATTCATTGGGCCTCTCTGTGTCAATTAATCAATCTGGGACAAACAAATGTGTAACTGTTGAAGATCTATCTCCTCTCGGCGACATGGATGGATCCTTAGATCTCTATGCTTGTGATGATGATGAGGGAAAGCGTATGCAGCTTTTCATTTCAACAAAACCATGTCCCTATCAATCTATACCCACTAAGGTGATTTTAGTCCGTCCGTTCATGACCTTTACGAATCGGCTTGGGCATGACATCTTCATTAAGTTAAGCGACGAAGATGAACCAAAAGTTCTTCATCCGCGTGATTCAAGAATTTCGTTTGCATTTCGGAAAACTGGTGGACATGATAAACTCCAGGTACGTTTAGACGATACCAGTTGGTCACTTCCTCTTCAAATTATGAAAGAAGATACAATATTTTTGGTCTTGAGGAGATATGATGGTATCCGTAGATTTCTGAGGATGGAAATTCGTGGCTATGAAGAAGGATCACGTTTTATCGTCGTGTTTCGCGTTGGATCCGCAGATGGCCCGATAAGGGTTGAGAACAGAACCGACAATACAATCAGCTTACGTCAGAGTGGGTTTGGTGAAGAGGCTTGGATTATGTTGTCACCCCTTTCAACAACAAATTTTTGTTGGGAGGATCCGTACAGTCACCACTTATTAGATACTAAAATTGGTAGTGATGGTAGTATTGGAGTTTGGAAACTTAATATGAGCACTGGACTATGTTCTTTAGAGGATGGTGAAACAGAATTATGTTGCTATGTGGCGAAAGAGGGTGATATTAAAGTAGTTAGATTCAGAGACAGTCAACATTTCGAATCTGACTTTCATGAAGAGATTGGATACTTAACAGCGGCAAGAAATTGGAGGTCTCAAATGCAGCAACCGGTGAAGGATAGTGAAGCAGCACCTACTGAGCTGATAGTTGAGTTAGGAGTTGTGGGCATTTCTATTATAGACCACAGGCCAAAAGAGCTGGCTTATATGTACTTGGAGAGAGTTTTTATCTCATATTCAACTGGATTTGATGGTGGAACAACAAATAGGTTCGAGATTATTTTTGGTCATTTGCAGTTTGATAATCAACTCCCCCTGACATTGATGCCAGTGCTGTTGGCTCCTGAGCAGACCACAGATATAAATCACCCAGCATTTCGAATGACAATAGAAATGCAGAATGAGAATATTGTTGGAATCCGAGTTTTCCCGTACATTTGTGTTCAGGTTACAGAGAAATCTTGGAGGCTTAACATTCACGAACCACTCATTTGGGCTGTCGTTGAGTTTTATAATAATCTTCAGCTAGGTCGTTTACCCCAAAGTTCTAGTATCACCCAAGTTGATCCGGAAATACGCATCAACCTAATAGATATTTCTGAAGTGAAGCTGAAAGTGGTTCTGGAGCCGGCACCAGCACAAAGACCCCATGGAGTTTTAGGCATATGGAGCCCCATACTGTCAGCTGTAGGAAATGCATTCAAGATACAGGTTCATCTAAGAAGAGTGATGCACAGGGATAGATACATGCGTGAAAGTTCAATTCTTCCTGCCATTGGAAACCGTATCTGGAGGGACTTTATTCATAATCCTTTACACCTAATATTTTCATTAGATGTACTTGGCATGGCAAGTTCAACGTTGGCTTCCCTTAGCAAAGGGTTTGCCGAACTTTCAACTGATGGCCAGTTTTTGCAATTACGGTCGAAGCAGGTCTGGTCACGGAGAATTACTGGTGTACGTGATGGTATAATCCAAGGCACAGAAGCTCTTGCTCAGGGTGTGGCTTTTGGGGTGTCAGGCGTGGTAACAAAGCCTGTGGAAAGTGCTAGACAAAATGGTTTACTTGGTCTGGCTCATGGATTAGGACGTGCGTTTCTTGGATTCATTGTACAACCTGTCAGTGGAGCATTAGATTTTTTCTCACTGACTGTTGATGGAATTGGTGCAAGTTGTTCCAAGTGTTTAGAGGTTTTCAACAAGAAGGTTCCTTTTCAAAGAGTTAGAAACCCTCGAGCCATCCATGCTGACAGTATTCTTAGAGAGTATTGTGAGAGAGAAGCTGTTGGCCAGATGGTTCTTCATCTTGCGGAAGGAAGTACACATTTTGGGTGTACTGAAATTTTCAAGGAGCCTTCGAAATTTGCATTTTCTGATTATTATGAAGAACACTTTATTGTACCGTACCAAAGAATTGTTTTGGTGACCAACAAGAGAGTCATGCTGCTACAGTGCTCAGATCCAGGAAAATTGGACAAGAAACCCTGCAAGATTCTGTGGGACGTTCCATGGGAAGAGCTCATGGCACTGGAGTTAGCAAAAGTGTCCAACAGTCGGCCTTCTCACTTAATCATCCATTTAAGAAGTTTCAAGAGGACAGAAAACTTTGTACGGGTTATAAAGTGTCATATTGAAGAAATTTCGGGAAGAGAACCTCAAGCTGTTAGTATTTGTTCGGTGGTGAGTAAATTCTGCAAAGATTATCAATCTGACATGAAATGCCTTGAACTGAAGGTTCCCTCGAGCCAGAGGCATGTTTATTTTTCCTGTAGTGAAGCTGATGGGAGAGATGCAAATATTTTAAACAAATCTATTATTAGATCGAGGGAGATTCTGTCATCCAGTTTCTCAAATGATGAGGGAAGATTTGTGAAACACAGTATGAACTTTACAAAGGTTTGGAGCAGTGACCTAGAGTTAAGAGGTCGTTGCATATTGTGCAAAAAGCAGGCCCTGGAAGCAGGAGGGATATGTACCATATGGAGACCAATATGTCCCGACGGATACATTTCCATTGGGGATATAGCTCATCTCGGCAGCCATCCTCCAAATGTCGCTGCTATTTACCGGCACGTGGAAGGAATGTTTGTACCGCCAGTAGGTTATGATTTGGTATGGAGAAACTGCCAAGACGACTACATAACTCCTGTATCAATCTGGCATCCAAGGGCTCCAGAAGGCTTTGTTGCTCCAGGATGTGTCGCAGTCGCGGATTTTGCTGAGCCAGAGCCTAACTTGGTATATTGTGTGGCTGAATCTCTTACTGAGGAGACAGTATTTGAGGAGCAGAAGATTTGGTCAGCACCAGATGCATACCCTTGGGCGTGTCATATCTACCAAATTCAAAGTCATGCGCTTCATTTCGTCGCTCTCAGACAAAGCAAGGAAGAATCCGATTGGAAGCCTATGAGAGTTCTAGATAAACCCCCCAGTCTGTTACCAACTTCAGGAAATCACTGA 13035 41.15 MLEDQVAYLLQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVPWSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEMNNSWLGSLVSTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRIQKFVELNQLAVYLDCDISPWYLDKPWEALHPSEWDKVFRFGTKNGKPAEGLTKKHGYILQPVSGYARYTKLRENDLADSHEPLQKASVYLDDVTLCLSKNGYRDILKLIDNFAAFNQRLKYAHYRPHVSVKTDPSSWWKYAFNSISDQLKKGSGKMSWEQVLKFANLRKRYISLYASLLKSDPTRAIVDDDKHIEELDRELDIELILQWRMLAHKFVQKSVESDQYLKKAKAKKSWWPFGWNNQSFKDEEEQFFSQEDWEQLNKFIGYKEDENSLSINVGKVDTLLTSLEVHMNRNASKLTDEAQHCLAELSCEDLNCSMKLFPETKVFDINLGSYQLSSPSGLLAVSAAVHDSLVGVFRYKPFDAKVDWSLVAKASPCYVTYLKDAIEQIMNFFESSTALGQTVALETAAALQMTIDEVKRSAQHQVNRALKDRSRFLLDLDIAAPKITIPAEFHLDDINSIKLLIDLGNLLIRTQDDLENVSSQELDMYLQFDVVLSDVSAFLVDGDYNWNQIFGKDTHKSPRVTEINIMPVIDKCGIILKLQQIRLENPSYPSTRLAVRLPSLGFHFSPARYHRLLKILKIFQEDNTNSDVPQPWNQADFEGWLSVLIRKGVGNREAEWQRRYCCLVGPYLYLIESPGSKSYNQYLSLRGKQTIQLPAELVGEVQHVLAVYDASRANSKIVEDTSALILRFDSDDSRKVWQNRLQGAIYRASASAPILGLSETSSNSEDSEMEPDESDGSMDSSIESVFLTGSLDELKVCFSSSNQHGQNFEKVLLAEERNLIEFRAIGGQVELSMRSNDMFIGTILKSLEIEDLVCSKTNSQSCYLARSFVHGEETPLLKNHGSDNSDLTQIEGDDKFFEAPETLVDYTDYQIQSPRKGLEYVKSQSSLQLKNFAPPSFSRIAGLLPPGGSETHSVDNEQSVTLDNFIKAQIALYDQNSPRYYDVDKQVSVTLATLSFFCRRPTVLALIEFANAINLEEESCESFSDHSSSGIIKHDIQMEDDEQFSKNTEDGIVKGLLGKGRSRVVFSLELKMSRAQIFLVKENESNLASLFQDNLLANIKVFPSSFSIEAALGNLRISDDSLSSSHMYYWACDMRNPGGSSFVELFFSSFNVDDEDYNGYEYSLLGKLSEVRIVYLNRFVQEVVSYFVGLVPENTEGVVKLKDQVTNSEKWFTTTEIEGSPALKLDLSLSKPIILMPRRTDSLDYLKLDIVHITIQNTFQWISGSKTDMSAVHLEILTVLIDDINLNVAVGAELGDSIIEDVKGVSVIIRRSLRDLLHQIPSLEVGIQIGVLKAVLSNKEYQIITECAMSNISETANVVPPLKNIPAASTDIIEPDTHQVLNGTEPETSEPFSVSMKLSVIIDLVQLCLRAGISGDASLATVQASNAWVLYNSNTNGEGFLSATLKGFTVLDDREGTELEFRRAIGVANSISTAWLQIPTDKPNQLSTDASSIEENISQAVPAMLILDAKFTQLSTFVSLSVQKPQLLVALDFLLAVVEFFVPTVGNILSDEEDKSYLHVTDAVILDQSPYRQPSSKLHISPGKPLVADDENFDHFIYDGNGGVMHLTDRNGVDLSAPSKEAMIYVGNGKKLQFKNITIKGGQFLDSCVFMGTNSSYSASKQDKVYLELGDNVVQQSSQDVQSQDITSNKSTEYTIELQAIGPELIFYNTSREVGESTILQNQLLHAQLDVYCSNVLHAYHAYRLLLKGDTTEFSANALGLTMESNGIRILEPFDSSVNYSNASGKTNIHLSVSDIFINFSFSILRLFLAVEEDIVAFLRMTSKKMTVVCSEFDKVGTIKSLNSDQVYSFWRPKAPPGFAILGDYVTPSEKPPTKGVLAVNTNFARLKRPISFRLIWPPVASQDISSYHINNYDSSPGDDNLGQEDCFYSIWFPEAPKGYVALGCVVSNGNTQPPVSAVFCIASSLVSACSLRDCISISTSVPCHSDFALWRVDNAAGSFLPADPTTFSVRGTAYELRRTIFGFPDVYHEVTKSSDSHALPGQTETSHLEKSPIVTSGQRFEAVADFQLIWWNRGSNSKKKLSIWRPVVPQGKIFFGDVAIKGLSFMVNSWFSSGLRFERPSTSIVLHHTGDEELYESPLDFQLVGQIKNQRGMEDISFWLPQAPPGFVSLGCIACKHKPKLQDFSALGCMRMDMVTWDQLMEESAWDSSDAKLITEPFSLWIVGIELGTFVVRSGPKRPQRSFNLKLAESHVTSGSDNTVIDAKVRTLSIAVFDDYAGLMVPLFNISLSGLGFSLHGRKGYLNSVVNFFLAARSYNDKYESWEPLVEPVDGFLRYHYDQNAPGSASQLHLTTARDLNMNISASSINMLIQAYASWINLTHVQEHNKTRDSLFSTSGGKSIGDVHAKRDYFIIPQNKLGQDIYIRATEIRGLQNVIRMPSGDMKPLKVPVSKNMLDSHLEGKRFKKDRRMVTIIISDGQLPRVEGPAVHQYTVAVRLTPVQGVFAELQHQQSARTSRSSSDHSLSAEVDLVHWNEIFFFKVESPIAQILEDEFHLHDHVNRISSIELASPELGKLGKWSGRLNCTVLLSPKPEFENIYQSKKGGRKSGSIQISPSRTGPWTTVRLNYATPAACWRLGNDVIASQVTVKDSSRYVTIRSLVSVQNNTDFILDVCLVSKHYKEGIHLLDETGNSDGSITGSNMVVVEEFYETEKYIPTAGWISCLKLSRDFSEGIIPEITSRVELPSGWEWIDDWHLDKTPHTAADGWVYAPDVKSLKWPDSSDTKSVNHARQRRWVRNRRQIVNNIKKEVFIGQLKPGDTVPLPLSVLKHSGLYIFHFRPATLNNCDEYSWSSVVDKPNKEDVNGPDILSEICISTLSESEELLYCVQTSGTSSSSSHILWFCLGIQALEIAKDIHSDPIQDWNLVIKAPLSIANYLPLVTEFSVLEKQKSGHFIDCCRAILHPGKTVKVYDADIRNPLFFSLLPQRGWLPVHEAVLISHPHGVPSRTLSLRSSITGRVVQVILEQNHNKEHPFLEKIIRFYAPYWFSISRCPPLTLHLVDRSGRKKSRKIYHRFKSNTDTDTFEEITAEEIHEGYTIASALNFNSLGLSVSINQSGTNKCVTVEDLSPLGDMDGSLDLYACDDDEGKRMQLFISTKPCPYQSIPTKVILVRPFMTFTNRLGHDIFIKLSDEDEPKVLHPRDSRISFAFRKTGGHDKLQVRLDDTSWSLPLQIMKEDTIFLVLRRYDGIRRFLRMEIRGYEEGSRFIVVFRVGSADGPIRVENRTDNTISLRQSGFGEEAWIMLSPLSTTNFCWEDPYSHHLLDTKIGSDGSIGVWKLNMSTGLCSLEDGETELCCYVAKEGDIKVVRFRDSQHFESDFHEEIGYLTAARNWRSQMQQPVKDSEAAPTELIVELGVVGISIIDHRPKELAYMYLERVFISYSTGFDGGTTNRFEIIFGHLQFDNQLPLTLMPVLLAPEQTTDINHPAFRMTIEMQNENIVGIRVFPYICVQVTEKSWRLNIHEPLIWAVVEFYNNLQLGRLPQSSSITQVDPEIRINLIDISEVKLKVVLEPAPAQRPHGVLGIWSPILSAVGNAFKIQVHLRRVMHRDRYMRESSILPAIGNRIWRDFIHNPLHLIFSLDVLGMASSTLASLSKGFAELSTDGQFLQLRSKQVWSRRITGVRDGIIQGTEALAQGVAFGVSGVVTKPVESARQNGLLGLAHGLGRAFLGFIVQPVSGALDFFSLTVDGIGASCSKCLEVFNKKVPFQRVRNPRAIHADSILREYCEREAVGQMVLHLAEGSTHFGCTEIFKEPSKFAFSDYYEEHFIVPYQRIVLVTNKRVMLLQCSDPGKLDKKPCKILWDVPWEELMALELAKVSNSRPSHLIIHLRSFKRTENFVRVIKCHIEEISGREPQAVSICSVVSKFCKDYQSDMKCLELKVPSSQRHVYFSCSEADGRDANILNKSIIRSREILSSSFSNDEGRFVKHSMNFTKVWSSDLELRGRCILCKKQALEAGGICTIWRPICPDGYISIGDIAHLGSHPPNVAAIYRHVEGMFVPPVGYDLVWRNCQDDYITPVSIWHPRAPEGFVAPGCVAVADFAEPEPNLVYCVAESLTEETVFEEQKIWSAPDAYPWACHIYQIQSHALHFVALRQSKEESDWKPMRVLDKPPSLLPTSGNH 4344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 317258 393583 - MELO3C003359.2.1 Cme04g00049 324310

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme04g00049 4344 SMART PH_update 799 912 IPR001849 -
Cme04g00049 4344 Pfam Repeating coiled region of VPS13 558 781 IPR031642 -
Cme04g00049 4344 SUPERFAMILY PH domain-like 797 914 - -
Cme04g00049 4344 Pfam N-terminal region of Chorein or VPS13 2 108 IPR026854 -
Cme04g00049 4344 Pfam PH domain 801 909 IPR001849 -
Cme04g00049 4344 Pfam Vacuolar sorting-associated protein 13, N-terminal 133 374 IPR031646 -
Cme04g00049 4344 PANTHER - 2770 3224 - -
Cme04g00049 4344 PANTHER - 3324 4318 - -
Cme04g00049 4344 PANTHER - 66 2708 - -
Cme04g00049 4344 Pfam SHR-binding domain of vacuolar-sorting associated protein 13 3313 3481 IPR009543 -
Cme04g00049 4344 MobiDBLite consensus disorder prediction 921 943 - -
Cme04g00049 4344 SMART dysfc 2929 2965 IPR006614 GO:0016021
Cme04g00049 4344 Pfam Vacuolar protein sorting-associated protein 62 4220 4293 IPR009291 -
Cme04g00049 4344 Pfam Vacuolar protein sorting-associated protein 62 2204 2386 IPR009291 -
Cme04g00049 4344 Pfam Vacuolar protein sorting-associated protein 62 1994 2157 IPR009291 -
Cme04g00049 4344 ProSiteProfiles PH domain profile. 798 910 IPR001849 -
Cme04g00049 4344 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 2770 3224 - -
Cme04g00049 4344 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 66 2708 - -
Cme04g00049 4344 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 3324 4318 - -
Cme04g00049 4344 Gene3D - 784 916 IPR011993 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme04g00049 K19525 VPS13A_C; vacuolar protein sorting-associated protein 13A/C - csv:101212417 8213.6
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00887 Cme-Chr2:11909105 Cme04g00049 Cme-Chr4:317258 1.72E-36 dispersed
Cme04g00049 Cme-Chr4:317258 Cme11g02403 Cme-Chr11:30882578 4.14E-07 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g579 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy04g00040 . Blo03g00821 . Bda07g00127 . . Bpe11g00358 . . . . Cmo19g00390 . . . . . . . . . . . . . Cla09g01192 Cam09g1259 Cec09g1274 Cco09g1310 . . Cre09g1223 . Csa03g04662 . Cme04g00049
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006969 1 2 4 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 2 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cme04g00049 Cme_Chr04 FPKM 0.0 0.0 0.0 0.0 16.765871 14.934114 14.418995 0.0 0.0 0.0